RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PRRG1O14668 218 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 EXOC3O60645 756 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 XYLBO75191 536 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 DLATP10515 647 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CPB1P15086 417 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 LIMS2Q7Z4I7 341 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 ANKRD36BP1Q96IX9 119 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 ZCWPW1Q9H0M4 648 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■□□□ 13.3
CTDSP1-214ENST00000497677 DACH1Q9UI36 760 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 POLIQ9UNA4 740 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
CTDSP1-214ENST00000497677 CST3P01034 146 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 TNNC2P02585 160 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 NR3C1P04150 777 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 KRT19P08727 400 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 LAMP2P13473 410 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 FSHRP23945 695 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 CASP4P49662 377 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 NLRP12P59046 1061 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 CLDN10P78369 228 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 LRRTM3Q86VH5 581 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 PDCL2Q8N4E4 241 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 ATAD1Q8NBU5 361 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 ITFG1Q8TB96 612 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 PARD3BQ8TEW8 1205 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 PGLYRP2Q96PD5 576 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 GSDMAQ96QA5 445 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 FNBP1Q96RU3 617 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 BPIFA3Q9BQP9 254 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 AVENQ9NQS1 362 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
CTDSP1-214ENST00000497677 ANK1P16157 1881 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 MTMR11A4FU01 709 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 RHOP08100 348 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 TNNI1P19237 187 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 BFSP1Q12934 665 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 DUSP4Q13115 394 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 NFIL3Q16649 462 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 SOWAHAQ2M3V2 549 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 ZCWPW2Q504Y3 356 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 POTEHQ6S545 545 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 METTL23Q86XA0 190 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 SMYD4Q8IYR2 804 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 TTC9BQ8N6N2 239 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 HPDLQ96IR7 371 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 KCNK12Q9HB15 430 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 CEP72Q9P209 647 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 SCN1AP35498 2009 aa17.16■□□□□ 0.34
CTDSP1-214ENST00000497677 MTCL1Q9Y4B5 1905 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 PRR33A8MZF0 331 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 GABRDO14764 452 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 KIF20AO95235 890 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 LRG1P02750 347 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 ZNF165P49910 485 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 TWF1Q12792 350 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 SLC5A9Q2M3M2 681 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 PABPC1LQ4VXU2 614 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 GET4Q7L5D6 327 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 OSTM1Q86WC4 334 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 TOP6BLQ8N6T0 577 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 FGF13Q92913 245 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 SORCS3Q9UPU3 1222 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 SLC27A5Q9Y2P5 690 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 YIPF1Q9Y548 306 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
CTDSP1-214ENST00000497677 TRIOO75962 3097 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 ANHXE9PGG2 379 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 CALUO43852 315 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 HUS1O60921 280 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 PTPN2P17706 415 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 DLG4P78352 724 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 PRSS36Q5K4E3 855 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 C1orf220Q5T0J3 134 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 DPH6Q7L8W6 267 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 MLKLQ8NB16 471 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 SPATA18Q8TC71 538 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms