RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 DPH5Q9H2P9 285 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 OSGEPQ9NPF4 335 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 SPATA7Q9P0W8 599 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 TMEM98Q9Y2Y6 226 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
SNRNP200-208ENST00000497539 AHCYL1O43865 530 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 B4GALT4O60513 344 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 FESP07332 822 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MMEP08473 750 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 TNNI1P19237 187 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 USP4Q13107 963 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 KYAT1Q16773 422 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 SPATS2Q86XZ4 545 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 RNF149Q8NC42 400 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 CD101Q93033 1021 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MAML3Q96JK9 1138 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 C16orf70Q9BSU1 422 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 APOBEC3GQ9HC16 384 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 PRMT7Q9NVM4 692 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 ANKFY1Q9P2R3 1169 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 UTRNP46939 3433 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 RASSF9O75901 435 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 IL18RAPO95256 599 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 ASS1P00966 412 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MARK3P27448 753 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MAGOHP61326 146 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 E2F5Q15329 346 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 PPP2R5EQ16537 467 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MAGOHBQ96A72 148 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 IVNS1ABPQ9Y6Y0 642 aa12.28□□□□□ -0.44
SNRNP200-208ENST00000497539 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 PHKA2P46019 1235 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 CENPCQ03188 943 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 EMC10Q5UCC4 262 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 YTHDF3Q7Z739 585 aaKnown RBP12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 RAPGEF5Q92565 580 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 SEC16BQ96JE7 1060 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 RMDN2Q96LZ7 410 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC12A6Q9UHW9 1150 aa12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.27□□□□□ -0.44
SNRNP200-208ENST00000497539 TTI1O43156 1089 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 HOXC6P09630 235 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 MCF2P10911 925 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 CDR1P51861 262 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 AMHR2Q16671 573 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 TMEM63BQ5T3F8 832 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 LRRC71Q8N4P6 559 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 OR5B17Q8NGF7 314 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 VCPIP1Q96JH7 1222 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 NAP1L3Q99457 506 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 EPAS1Q99814 870 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 PTPN18Q99952 460 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 RNPEPQ9H4A4 650 aa12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-208ENST00000497539 ATXN2Q99700 1313 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 KRIT1O00522 736 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 IGHA2P01877 340 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 INSRRP14616 1297 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 HSPA6P17066 643 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 ABCB4P21439 1286 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 NOP14P78316 857 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 NCOA4Q13772 614 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 MORN1Q5T089 497 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 FAM228AQ86W67 206 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 PI4K2AQ9BTU6 479 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 SEPT11Q9NVA2 429 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 PDLIM1O00151 329 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 RANBP1P43487 201 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 KRT71Q3SY84 523 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 DCAF12L1Q5VU92 463 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 RHPN2Q8IUC4 686 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 KIRREL3Q8IZU9 778 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 SEC14L1Q92503 715 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 ZSWIM1Q9BR11 485 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms