RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 FAM160B2Q86V87 743 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 IQCA1Q86XH1 822 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 CCAR1Q8IX12 1150 aaKnown RBP5.6□□□□□ -1.51
CSMD3-208ENST00000497026 CKAP2LQ8IYA6 745 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 MB21D2Q8IYB1 491 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-208ENST00000497026 ABRAQ8N0Z2 381 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 ST13P5Q8NFI4 369 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-208ENST00000497026 ANKS1AQ92625 1134 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 SNX21Q969T3 373 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 ZNF830Q96NB3 372 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-208ENST00000497026 DEFB118Q96PH6 123 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 C22orf23Q9BZE7 217 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 KRT23Q9C075 422 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 RANBP17Q9H2T7 1088 aaKnown RBP5.6□□□□□ -1.51
CSMD3-208ENST00000497026 CPVLQ9H3G5 476 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 YY1AP1Q9H869 796 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 IPPKQ9H8X2 491 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 L2HGDHQ9H9P8 463 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 ASTN1O14525 1302 aa5.6□□□□□ -1.51
CSMD3-208ENST00000497026 VGLL3A8MV65 326 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 ZBED4O75132 1171 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 CDC45O75419 566 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 SOD2P04179 222 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 ITGB3P05106 788 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 ADRB1P08588 477 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 GOLGA8HP0CJ92 632 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 GNAT1P11488 350 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 FCER1AP12319 257 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 ZNF28P17035 718 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 COPB2P35606 906 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 GPR85P60893 370 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 EFEMP1Q12805 493 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 SPATS1Q496A3 300 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 MUM1L1Q5H9M0 696 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 FAM26FQ5R3K3 315 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 SYDE2Q5VT97 1194 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 TRMT10BQ6PF06 316 aaKnown RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 CCDC174Q6PII3 467 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 RSPO2Q6UXX9 243 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 CHST3Q7LGC8 479 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 DPP9Q86TI2 863 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 PROSER1Q86XN7 944 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 NCOA7Q8NI08 942 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 PHOSPHO1Q8TCT1 267 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 DIS3LQ8TF46 1054 aaKnown RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 CHURC1Q8WUH1 139 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 ZCCHC14Q8WYQ9 949 aaKnown RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 TNPO1Q92973 898 aaKnown RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 BCCIPQ9P287 314 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 TELO2Q9Y4R8 837 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 DDX49Q9Y6V7 483 aaKnown RBP5.59□□□□□ -1.51
CSMD3-208ENST00000497026 PDE4DIPQ5VU43 2346 aa5.59□□□□□ -1.51
CSMD3-208ENST00000497026 CLGNO14967 610 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 PDPK1O15530 556 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 MAFKO60675 156 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 ICAM1P05362 532 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 GLRBP48167 497 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 TROAPQ12815 778 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 IKQ13123 557 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-208ENST00000497026 KCTD2Q14681 263 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 KIZQ2M2Z5 673 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 SLC35G1Q2M3R5 365 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 MTERF2Q49AM1 385 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 PRAMEF19Q5SWL8 479 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 GPATCH4Q5T3I0 446 aaKnown RBP5.58□□□□□ -1.52
CSMD3-208ENST00000497026 FOXB2Q5VYV0 432 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 CREB3L3Q68CJ9 461 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 LIMS2Q7Z4I7 341 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 GAS2L3Q86XJ1 694 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 LGI4Q8N135 537 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 FAM133AQ8N9E0 248 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 CHST13Q8NET6 341 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 IGDCC4Q8TDY8 1250 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 CDC6Q99741 560 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 UBAC1Q9BSL1 405 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 CD244Q9BZW8 370 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 UBA5Q9GZZ9 404 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 KAT14Q9H8E8 782 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 A1CFQ9NQ94 594 aaKnown RBP5.58□□□□□ -1.52
CSMD3-208ENST00000497026 HOMER2Q9NSB8 354 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 RNF146Q9NTX7 359 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 OGFRQ9NZT2 677 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 OGDHLQ9ULD0 1010 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 PFASO15067 1338 aa5.58□□□□□ -1.52
CSMD3-208ENST00000497026 TNRC18O15417 2968 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-208ENST00000497026 BAZ2BQ9UIF8 2168 aaKnown RBP5.58□□□□□ -1.52
CSMD3-208ENST00000497026 IFIT3O14879 490 aaKnown RBP5.57□□□□□ -1.52
CSMD3-208ENST00000497026 ADCY6O43306 1168 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 B4GALT3O60512 393 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 SNAI1O95863 264 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-208ENST00000497026 CKMP06732 381 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 ALAS1P13196 640 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 INSRRP14616 1297 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 DDIT3P35638 169 aa5.57□□□□□ -1.52
CSMD3-208ENST00000497026 CNTN2Q02246 1040 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms