RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TRIAP1O43715 76 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 SOAT2O75908 522 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 C1RP00736 705 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 IGLV2-14P01704 120 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 GNAI2P04899 355 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 PPP3CBP16298 524 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 LPOP22079 712 aaPredicted RBP6.89□□□□□ -1.31
MDM2-220ENST00000496959 GRIA3P42263 894 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 NXPH1P58417 271 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 ANAPC15P60006 121 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 MRPS21P82921 87 aaKnown RBP6.89□□□□□ -1.31
MDM2-220ENST00000496959 ITIH3Q06033 890 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 KIF22Q14807 665 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 CCDC157Q569K6 752 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 ARHGEF25Q86VW2 580 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 TNPO1Q92973 898 aaKnown RBP6.89□□□□□ -1.31
MDM2-220ENST00000496959 LRFN3Q9BTN0 628 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 TCF7L1Q9HCS4 588 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 LMBRD1Q9NUN5 540 aa6.89□□□□□ -1.31
MDM2-220ENST00000496959 hCG_2014768A0A024R1R8 64 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 A0A0B4J269 797 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 PHKA1P46020 1223 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 MAP2K6P52564 334 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 TUBB3Q13509 450 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 FAM9AQ8IZU1 332 aaPredicted RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 DDX17Q92841 729 aaKnown RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 NUP88Q99567 741 aaPredicted RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 MRPL46Q9H2W6 279 aaKnown RBP6.88□□□□□ -1.31
MDM2-220ENST00000496959 ETAA1Q9NY74 926 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
MDM2-220ENST00000496959 CHRM2P08172 466 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 CT47B1P0C2W7 299 aaPredicted RBP6.87□□□□□ -1.31
MDM2-220ENST00000496959 TYRP14679 529 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 NDUFV1P49821 464 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 MAPK10P53779 464 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 C21orf58P58505 322 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 SH2D3CQ8N5H7 860 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 PSD4Q8NDX1 1056 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 GTPBP4Q9BZE4 634 aaKnown RBP6.87□□□□□ -1.31
MDM2-220ENST00000496959 KLK15Q9H2R5 256 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 ADARB2Q9NS39 739 aaKnown RBP6.87□□□□□ -1.31
MDM2-220ENST00000496959 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
MDM2-220ENST00000496959 PNPOQ9NVS9 261 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 NR2E3Q9Y5X4 410 aa6.87□□□□□ -1.31
MDM2-220ENST00000496959 POLR2AP24928 1970 aaKnown RBP6.86□□□□□ -1.31
MDM2-220ENST00000496959 MATN4O95460 622 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 ITGALP20701 1170 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 USP37Q86T82 979 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 FBXO41Q8TF61 875 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 ZNF384Q8TF68 577 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 VOPP1Q96AW1 172 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 HOOK2Q96ED9 719 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 MVB12AQ96EY5 273 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 UROC1Q96N76 676 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 OSBPL9Q96SU4 736 aa6.86□□□□□ -1.31
MDM2-220ENST00000496959 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
MDM2-220ENST00000496959 CUX2O14529 1486 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 ADM5C9JUS6 153 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 H3BUI4 141 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 VPS4BO75351 444 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 KIF20AO95235 890 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 HNRNPMP52272 730 aaKnown RBP eCLIP6.85□□□□□ -1.31
MDM2-220ENST00000496959 TXNRD1Q16881 649 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 TAF2Q6P1X5 1199 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 BRIX1Q8TDN6 353 aaKnown RBP6.85□□□□□ -1.31
MDM2-220ENST00000496959 MAP3K14Q99558 947 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 TPSD1Q9BZJ3 242 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 IL17RBQ9NRM6 502 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.85□□□□□ -1.31
MDM2-220ENST00000496959 KLC4Q9NSK0 619 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 ASB6Q9NWX5 421 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 PCDHA1Q9Y5I3 950 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 ENTPD2Q9Y5L3 495 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 RAD54BQ9Y620 910 aa6.85□□□□□ -1.31
MDM2-220ENST00000496959 PROP1O75360 226 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 PF4V1P10720 104 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 IGBP1P78318 339 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 TCF15Q12870 199 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 PPP1R3BQ86XI6 285 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 CDK5RAP3Q96JB5 506 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 TIMP4Q99727 224 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 ALG8Q9BVK2 526 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 SMOC2Q9H3U7 446 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 CPNE5Q9HCH3 593 aa6.84□□□□□ -1.31
MDM2-220ENST00000496959 M0QYG6 137 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 ALDH1L1O75891 902 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 AHSGP02765 367 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 CHRM3P20309 590 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 NHLH1Q02575 133 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
MDM2-220ENST00000496959 HPS3Q969F9 1004 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms