RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PSMC3P17980 439 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 WSCD1Q658N2 575 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 ZC3H14Q6PJT7 736 aaKnown RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 ZSWIM2Q8NEG5 633 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 IRF7Q92985 503 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 LRRC3Q9BY71 257 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 FGFBP2Q9BYJ0 223 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 ZSCAN16Q9H4T2 348 aaPredicted RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 ZNF334Q9HCZ1 680 aaPredicted RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 PANK4Q9NVE7 773 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 MRPS17Q9Y2R5 130 aaKnown RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
FN1-226ENST00000496542 MORC2Q9Y6X9 1032 aaPredicted RBP13.99□□□□□ -0.17
FN1-226ENST00000496542 COL4A2P08572 1712 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 NCANO14594 1321 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 FRYLO94915 3013 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 LMNAP02545 664 aaKnown RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 MAGEA9P43362 315 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 WNT7BP56706 349 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 POU5F1Q01860 360 aaKnown RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 SV2CQ496J9 727 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 STXBP5Q5T5C0 1151 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 ITIH5Q86UX2 942 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 BRSK2Q8IWQ3 736 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 MAML2Q8IZL2 1156 aaPredicted RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 DEPDC1BQ8WUY9 529 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 PSMG2Q969U7 264 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 FAM84AQ96KN4 292 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 ZNF560Q96MR9 790 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 LPIN3Q9BQK8 851 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 ZCWPW1Q9H0M4 648 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 TRPV4Q9HBA0 871 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 RBAKQ9NYW8 714 aaPredicted RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 NDRG2Q9UN36 371 aaKnown RBP13.98□□□□□ -0.17
FN1-226ENST00000496542 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
FN1-226ENST00000496542 NUP210Q8TEM1 1887 aaPredicted RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 ZNF263O14978 683 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 NCAM2O15394 837 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 PRPF6O94906 941 aaKnown RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 GARTP22102 1010 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 ALCAMQ13740 583 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 VEPH1Q14D04 833 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 GAREM2Q75VX8 874 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 DNAJB7Q7Z6W7 309 aaPredicted RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 NT5DC4Q86YG4 428 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 GPIHBP1Q8IV16 184 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 MFSD6LQ8IWD5 586 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 CCDC65Q8IXS2 484 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 YAF2Q8IY57 180 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 CLDN23Q96B33 292 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 RSPRY1Q96DX4 576 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 NELL2Q99435 816 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 CBWD1Q9BRT8 395 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 ATXN3LQ9H3M9 355 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 PCIF1Q9H4Z3 704 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 ABI2Q9NYB9 513 aaPredicted RBP13.97□□□□□ -0.17
FN1-226ENST00000496542 PIAS3Q9Y6X2 628 aa13.97□□□□□ -0.17
FN1-226ENST00000496542 ZNF638Q14966 1978 aaKnown RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 SHISA7A6NL88 538 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 KPNA7A9QM74 516 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 MAN2B1O00754 1011 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 SPTLC2O15270 562 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 FGF19O95750 216 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 LDHAP00338 332 aaKnown RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 ITGB3P05106 788 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 ATF6P18850 670 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 GABRR2P28476 465 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 PNPLA4P41247 253 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 TUFMP49411 452 aaKnown RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 BFSP1Q12934 665 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 TAF12Q16514 161 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 ARHGAP15Q53QZ3 475 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 GPR158Q5T848 1215 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 LRRTM3Q86VH5 581 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 C1orf127Q8N9H9 656 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 LINC00301Q8NCQ3 95 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 CACTINQ8WUQ7 758 aaKnown RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 E2F7Q96AV8 911 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 BORCS6Q96GS4 357 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
FN1-226ENST00000496542 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
FN1-226ENST00000496542 HSFX1Q9UBD0 423 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms