RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CASD1Q96PB1 797 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 CDK5RAP1Q96SZ6 601 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 TISP43B9A030 160 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ADRB2P07550 413 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 PDGFRBP09619 1106 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 SSR1P43307 286 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 CLCNKBP51801 687 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ERVK-21P61565 698 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 PLCB3Q01970 1234 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 MBTPS1Q14703 1052 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ZNF677Q86XU0 584 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 GLYCTKQ8IVS8 523 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 SLC39A11Q8N1S5 342 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 CXXC1Q9P0U4 656 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 LCMT1Q9UIC8 334 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-212ENST00000496462 STRA6Q9BX79 667 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 ASB3Q9Y575 518 aa9.18□□□□□ -0.94
U2AF1-212ENST00000496462 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PAEPP09466 180 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 SETSIPP0DME0 302 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CSH1P0DML2 217 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CSH2P0DML3 217 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 GNA15P30679 374 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CC2D1AQ6P1N0 951 aaPredicted RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 DCUN1D2Q6PH85 259 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 TAS1R2Q8TE23 839 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 SLC35C1Q96A29 364 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 C18orf25Q96B23 403 aaPredicted RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 FBXO44Q9H4M3 255 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 TUBGCP4Q9UGJ1 667 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 A0A0C4DFX4 3053 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 LINC01553A4QN01 128 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PMM2O15305 246 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 ADSSP30520 456 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 GBP1P32455 592 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 OR1D2P34982 312 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 BRCC3P46736 316 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 LILRA4P59901 499 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 ZBED6P86452 979 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CLLU1OSQ5K130 101 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 VSTM1Q6UX27 236 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 RBBP8NLQ8NC74 664 aaPredicted RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PPP1R10Q96QC0 940 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 DUSP9Q99956 384 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 DDX50Q9BQ39 737 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 ACBD6Q9BR61 282 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PLCB1Q9NQ66 1216 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 TRPM5Q9NZQ8 1165 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CTSAP10619 480 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 HOXB8P17481 243 aaPredicted RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 ADORA2BP29275 332 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 RDXP35241 583 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 E2F5Q15329 346 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 WSCD1Q658N2 575 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 COLGALT2Q8IYK4 626 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 SPC24Q8NBT2 197 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 GLIS3Q8NEA6 775 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 PDZD8Q8NEN9 1154 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 CTNNBL1Q8WYA6 563 aaPredicted RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 SMARCD1Q96GM5 515 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 LSM7Q9UK45 103 aaKnown RBP9.17□□□□□ -0.94
U2AF1-212ENST00000496462 BACE2Q9Y5Z0 518 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 SCN10AQ9Y5Y9 1956 aa9.17□□□□□ -0.94
U2AF1-212ENST00000496462 TTC28Q96AY4 2481 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 LRRN2O75325 713 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 TACC1O75410 805 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 NEBLO76041 1014 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 SLC34A2O95436 690 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ADCY5O95622 1261 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ASS1P00966 412 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 MTHFRP42898 656 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 AMPD2Q01433 879 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ZCWPW2Q504Y3 356 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 PIK3R5Q8WYR1 880 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 FAM149B1Q96BN6 582 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 MRFAP1L1Q96HT8 127 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 MED15Q96RN5 788 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 POP1Q99575 1024 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 XPO4Q9C0E2 1151 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 AFF4Q9UHB7 1163 aaKnown RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 LOXHD1Q8IVV2 1947 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms