RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 ARMT1Q9H993 441 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 GPRC5DQ9NZD1 345 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 FNIP2Q9P278 1114 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 STAP2Q9UGK3 403 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 POLHQ9Y253 713 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 STXBP5LQ9Y2K9 1186 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 RIPOR2Q9Y4F9 1068 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 PNPLA7Q6ZV29 1317 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 PROP1O75360 226 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 ECHS1P30084 290 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 GUCY1A2P33402 732 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 HK3P52790 923 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 RAB1AP62820 205 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 NKX6-1P78426 367 aaPredicted RBP4.7□□□□□ -1.66
CLK1-214ENST00000496205 MXRA7P84157 204 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 CDC42EP1Q00587 391 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 MAPK7Q13164 816 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 BIRC2Q13490 618 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 CNN3Q15417 329 aaKnown RBP4.7□□□□□ -1.66
CLK1-214ENST00000496205 ANO6Q4KMQ2 910 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 APOA5Q6Q788 366 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 SRGAP1Q7Z6B7 1085 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 DRC7Q8IY82 874 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 PQLC1Q8N2U9 271 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 STON2Q8WXE9 905 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 TTC17Q96AE7 1141 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 TMX3Q96JJ7 454 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 STRBPQ96SI9 672 aaKnown RBP4.7□□□□□ -1.66
CLK1-214ENST00000496205 C22orf23Q9BZE7 217 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 ZMAT3Q9HA38 289 aaKnown RBP4.7□□□□□ -1.66
CLK1-214ENST00000496205 IL17RBQ9NRM6 502 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 ASB6Q9NWX5 421 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 PHTF1Q9UMS5 762 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 PCDHA3Q9Y5H8 950 aa4.7□□□□□ -1.66
CLK1-214ENST00000496205 ATRNL1Q5VV63 1379 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 WDR91A4D1P6 747 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 WIPF3A6NGB9 483 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 NT5C1B-RDH14C9J2C7 533 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 SGTAO43765 313 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 ZNF280AP59817 542 aaPredicted RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 MRPS35P82673 323 aaKnown RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 OCA2Q04671 838 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 TLE1Q04724 770 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 SNAPC2Q13487 334 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 MTM1Q13496 603 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 PLS1Q14651 629 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 KIAA0753Q2KHM9 967 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 KHDC1Q4VXA5 237 aaKnown RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 ATXN7L2Q5T6C5 722 aaPredicted RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 ZNF425Q6IV72 752 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 ZNF788Q6ZQV5 615 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 HEATR3Q7Z4Q2 680 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 SAMD3Q8N6K7 520 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 OR7D4Q8NG98 312 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 NACC2Q96BF6 587 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 FAM204AQ9H8W3 233 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 BCO1Q9HAY6 547 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 TDP1Q9NUW8 608 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 ARPP21Q9UBL0 812 aaPredicted RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 TAGLN3Q9UI15 199 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 AJAP1Q9UKB5 411 aaPredicted RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 ACTL7AQ9Y615 435 aa4.69□□□□□ -1.66
CLK1-214ENST00000496205 ARID4BQ4LE39 1312 aaPredicted RBP4.69□□□□□ -1.66
CLK1-214ENST00000496205 PQBP1O60828 265 aaKnown RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 ENDOD1O94919 500 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 LDHAP00338 332 aaKnown RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 PHKG2P15735 406 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 MALP21145 153 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 ALDH5A1P51649 535 aaPredicted RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 CLRN1P58418 232 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 PICALMQ13492 652 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 HDAC1Q13547 482 aaPredicted RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 SPDYE7PQ495Y7 208 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 RNF220Q5VTB9 566 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 XRRA1Q6P2D8 792 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 MED25Q71SY5 747 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 TTC7BQ86TV6 843 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 SKAP1Q86WV1 359 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 SPICE1Q8N0Z3 855 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 ACTRT2Q8TDY3 377 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 FBXO41Q8TF61 875 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 PAWRQ96IZ0 340 aaKnown RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 AIFM2Q9BRQ8 373 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 CASS4Q9NQ75 786 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 KMT5AQ9NQR1 393 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 TMEM74BQ9NUR3 256 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 SLC17A6Q9P2U8 582 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 LRIT1Q9P2V4 623 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 NOX1Q9Y5S8 564 aa4.68□□□□□ -1.66
CLK1-214ENST00000496205 MYBBP1AQ9BQG0 1328 aaKnown RBP4.68□□□□□ -1.66
CLK1-214ENST00000496205 A0A088AWK7 358 aa4.67□□□□□ -1.66
CLK1-214ENST00000496205 LOC102724159A0A0B4J2E5 919 aa4.67□□□□□ -1.66
CLK1-214ENST00000496205 A0A1B0GTW7 788 aa4.67□□□□□ -1.66
CLK1-214ENST00000496205 CAPN8A6NHC0 703 aa4.67□□□□□ -1.66
CLK1-214ENST00000496205 CXorf49A8MYA2 514 aaPredicted RBP4.67□□□□□ -1.66
CLK1-214ENST00000496205 PHF2O75151 1096 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms