RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 NLRP9Q7RTR0 991 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KRT28Q7Z3Y7 464 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TMC4Q7Z404 712 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SLFN11Q7Z7L1 901 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DHDDSQ86SQ9 333 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CCDC84Q86UT8 332 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 SATL1Q86VE3 508 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 C11orf74Q86VG3 221 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 JAMLQ86YT9 394 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TBC1D10CQ8IV04 446 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ANKMY2Q8IV38 441 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 AHI1Q8N157 1196 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SIX5Q8N196 739 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 MARVELD2Q8N4S9 558 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CSGALNACT2Q8N6G5 542 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 METTL13Q8N6R0 699 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.88□□□□□ -1.95
MDC1-208ENST00000494654 C12orf50Q8NA57 414 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 CCDC110Q8TBZ0 833 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DDI1Q8WTU0 396 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PYROXD1Q8WU10 500 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 C7orf43Q8WVR3 580 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 JADE3Q92613 823 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ANKS1AQ92625 1134 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ESR2Q92731 530 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ARHGEF2Q92974 986 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TNFRSF25Q93038 417 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PHKBQ93100 1093 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 MCUR1Q96AQ8 359 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 EFHD2Q96C19 240 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 DGCR14Q96DF8 476 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 PTCD3Q96EY7 689 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 HES6Q96HZ4 224 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DYDC2Q96IM9 177 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DNAJC1Q96KC8 554 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 COX4I2Q96KJ9 171 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 LRGUKQ96M69 825 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TTC25Q96NG3 672 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SLC4A9Q96Q91 983 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PPP1R10Q96QC0 940 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 LRRC37BQ96QE4 947 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DBNDD2Q9BQY9 259 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ERP44Q9BS26 406 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 BTBD10Q9BSF8 475 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 HGH1Q9BTY7 390 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PHF20Q9BVI0 1012 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 OSBPL10Q9BXB5 764 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SLC26A6Q9BXS9 759 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CADM1Q9BY67 442 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 STK33Q9BYT3 514 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TRIM55Q9BYV6 548 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CRNKL1Q9BZJ0 848 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TANGO6Q9C0B7 1094 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KLHL4Q9C0H6 718 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CCDC68Q9H2F9 335 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CDC42EP4Q9H3Q1 356 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TPK1Q9H3S4 243 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RETREG1Q9H6L5 497 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZNF696Q9H7X3 374 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 VRTNQ9H8Y1 702 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 C17orf75Q9HAS0 396 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TRPC7Q9HCX4 862 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 UBN1Q9NPG3 1134 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TCP11L1Q9NUJ3 509 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TBC1D23Q9NUY8 699 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 NKIRAS1Q9NYS0 192 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 UBAP1Q9NZ09 502 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 GRHL1Q9NZI5 618 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SENP1Q9P0U3 644 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 UVRAGQ9P2Y5 699 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ARMCX3Q9UH62 379 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 PCYOX1Q9UHG3 505 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 AMACRQ9UHK6 382 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 GGT7Q9UJ14 662 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PHTF1Q9UMS5 762 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PACSIN2Q9UNF0 486 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 FAF1Q9UNN5 650 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 ITM2BQ9Y287 266 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RABGAP1Q9Y3P9 1069 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TSC22D4Q9Y3Q8 395 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TIMM22Q9Y584 194 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 N6AMT1Q9Y5N5 214 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 GPC6Q9Y625 555 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZSWIM8A7E2V4 1837 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 COL11A1P12107 1806 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 SF3B1O75533 1304 aaKnown RBP eCLIP2.88□□□□□ -1.95
MDC1-208ENST00000494654 FLT1P17948 1338 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CNTNAP5Q8WYK1 1306 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SLIT2O94813 1529 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ROBO3Q96MS0 1386 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FUOMA2VDF0 154 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 IQCA1LA6NCM1 817 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 SMIM23A6NLE4 172 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 FAM196BA6NMK8 535 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 NEURL1BA8MQ27 555 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 TTC34A8MYJ7 566 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF701M0R085 212 aaPredicted RBP2.87□□□□□ -1.95
MDC1-208ENST00000494654 PODXLO00592 558 aa2.87□□□□□ -1.95
MDC1-208ENST00000494654 ZNF213O14771 459 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms