RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PLVAPQ9BX97 442 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PRMT7Q9NVM4 692 aaPredicted RBP14.62□□□□□ -0.07
VCP-207ENST00000493886 TPD52L2O43399 206 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 STRNO43815 780 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 TNNC2P02585 160 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 ADCYAP1R1P41586 468 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 PHKA2P46019 1235 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 GCLCP48506 637 aaPredicted RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 CYP1B1Q16678 543 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 TTC27Q6P3X3 843 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 ANKRD36BP1Q96IX9 119 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 CISHQ9NSE2 258 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 SLC12A6Q9UHW9 1150 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 MAGEB2O15479 319 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 FAM107AO95990 144 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 ZNF286BP0CG31 522 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 CXCL8P10145 99 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 RARAP10276 462 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 HNRNPH1P31943 449 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 PTP4A2Q12974 167 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 SIX1Q15475 284 aaPredicted RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 SPRED3Q2MJR0 410 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 ZNF699Q32M78 642 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 CCDC137Q6PK04 289 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 TMEM192Q8IY95 271 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 EMID1Q96A84 441 aaPredicted RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 KATNBL1Q9H079 304 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 RPF1Q9H9Y2 349 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 MRPL47Q9HD33 250 aaKnown RBP14.61□□□□□ -0.07
VCP-207ENST00000493886 MORF4L1Q9UBU8 362 aa14.61□□□□□ -0.07
VCP-207ENST00000493886 CSDE1O75534 798 aaKnown RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 PROSCO94903 275 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 SNAI1O95863 264 aaPredicted RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 MNAT1P51948 309 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 POU5F1BQ06416 359 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 ZNF467Q7Z7K2 595 aaPredicted RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 LINC01465Q8N7H1 131 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 PPP1R16BQ96T49 567 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 XYLT2Q9H1B5 865 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 AKT3Q9Y243 479 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 ANK1P16157 1881 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 A0A087WZ62 844 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 GPR25O00155 361 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 IBSPP21815 317 aaPredicted RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 DRG2P55039 364 aaKnown RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 PPP2R2AP63151 447 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 GPR162Q16538 588 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 FAM187BQ17R55 369 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 ZNF394Q53GI3 561 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 ARFGAP2Q8N6H7 521 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 FDXACB1Q9BRP7 624 aaPredicted RBP14.6□□□□□ -0.07
VCP-207ENST00000493886 SCINQ9Y6U3 715 aa14.6□□□□□ -0.07
VCP-207ENST00000493886 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 A6NNZ2 444 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 FSCN2O14926 492 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 IL18RAPO95256 599 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 COILP38432 576 aaPredicted RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 MTMR3Q13615 1198 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 TUBB8Q3ZCM7 444 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 FBXO25Q8TCJ0 367 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 C16orf70Q9BSU1 422 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 PTPN22Q9Y2R2 807 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.59□□□□□ -0.07
VCP-207ENST00000493886 MGAMO43451 1857 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 PODXLO00592 558 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 MMP8P22894 467 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 ASPAP45381 313 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 SLCO1A2P46721 670 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 AMHR2Q16671 573 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 DPP9Q86TI2 863 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 CCDC105Q8IYK2 499 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 C12orf50Q8NA57 414 aaPredicted RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 RUNDC3BQ96NL0 473 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 SELENOSQ9BQE4 189 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 ZDHHC18Q9NUE0 388 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 COL1A2P08123 1366 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 GMNCA6NCL1 334 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 VTNP04004 478 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 FNTAP49354 379 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 RAPGEF5Q92565 580 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 PARVAQ9NVD7 372 aa14.59□□□□□ -0.07
VCP-207ENST00000493886 DDX20Q9UHI6 824 aaKnown RBP14.59□□□□□ -0.07
VCP-207ENST00000493886 ZSWIM8A7E2V4 1837 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 LSM8O95777 96 aaKnown RBP14.58□□□□□ -0.08
VCP-207ENST00000493886 KRT19P08727 400 aa14.58□□□□□ -0.08
VCP-207ENST00000493886 STAG3L1P0CL83 205 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms