RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 C17orf75Q9HAS0 396 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 IL1RAPL1Q9NZN1 696 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.01■□□□□ 0.95
RNF40-203ENST00000493683 RALBP11234 206 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 MUTP22033 750 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 RPA1P27694 616 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 CYGBQ8WWM9 190 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 CCT7Q99832 543 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 APPL1Q9UKG1 709 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SNX9Q9Y5X1 595 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 IGSF9BQ9UPX0 1349 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 USP31Q70CQ4 1352 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SERPINI2O75830 405 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 COG2Q14746 738 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SPDYAQ5MJ70 313 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 DEPDC1Q5TB30 811 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 NUP93Q8N1F7 819 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SYNE4Q8N205 404 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 FEZF2Q8TBJ5 459 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 FAM162AQ96A26 154 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 NIF3L1Q9GZT8 377 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 ANKEF1Q9NU02 776 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 KLHL11Q9NVR0 708 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 WDR93Q6P2C0 686 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 TADA1Q96BN2 335 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SLC40A1Q9NP59 571 aa21.01■□□□□ 0.95
RNF40-203ENST00000493683 SV2CQ496J9 727 aa21■□□□□ 0.95
RNF40-203ENST00000493683 BRINP3Q76B58 766 aa21■□□□□ 0.95
RNF40-203ENST00000493683 PRPF39Q86UA1 669 aaKnown RBP21■□□□□ 0.95
RNF40-203ENST00000493683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21■□□□□ 0.95
RNF40-203ENST00000493683 GGT7Q9UJ14 662 aa21■□□□□ 0.95
RNF40-203ENST00000493683 ZNF263O14978 683 aa21■□□□□ 0.95
RNF40-203ENST00000493683 COPAP53621 1224 aa21■□□□□ 0.95
RNF40-203ENST00000493683 EMC2Q15006 297 aa21■□□□□ 0.95
RNF40-203ENST00000493683 B4GALNT2Q8NHY0 566 aa21■□□□□ 0.95
RNF40-203ENST00000493683 GTF3C2Q8WUA4 911 aaPredicted RBP21■□□□□ 0.95
RNF40-203ENST00000493683 MAGEA13PA6NCF6 341 aa21■□□□□ 0.95
RNF40-203ENST00000493683 AIM2O14862 343 aa21■□□□□ 0.95
RNF40-203ENST00000493683 ARIH2O95376 493 aa21■□□□□ 0.95
RNF40-203ENST00000493683 TXNP10599 105 aaKnown RBP21■□□□□ 0.95
RNF40-203ENST00000493683 BOLA3Q53S33 107 aa21■□□□□ 0.95
RNF40-203ENST00000493683 MDH1BQ5I0G3 518 aa21■□□□□ 0.95
RNF40-203ENST00000493683 LMBRD2Q68DH5 695 aaPredicted RBP21■□□□□ 0.95
RNF40-203ENST00000493683 ABHD8Q96I13 439 aa21■□□□□ 0.95
RNF40-203ENST00000493683 PIN4Q9Y237 131 aaKnown RBP21■□□□□ 0.95
RNF40-203ENST00000493683 HLA-DRAP01903 254 aa21■□□□□ 0.95
RNF40-203ENST00000493683 PLEKHA8Q96JA3 519 aa21■□□□□ 0.95
RNF40-203ENST00000493683 ZC3H4Q9UPT8 1303 aaKnown RBP21■□□□□ 0.95
RNF40-203ENST00000493683 DAGLBQ8NCG7 672 aa21■□□□□ 0.95
RNF40-203ENST00000493683 AGAP3Q96P47 875 aa21■□□□□ 0.95
RNF40-203ENST00000493683 CXorf56Q9H5V9 222 aa21■□□□□ 0.95
RNF40-203ENST00000493683 ABCC3O15438 1527 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 KRT87PA6NCN2 255 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 NPEPPSP55786 919 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 C16orf86Q6ZW13 317 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 PLEKHM3Q6ZWE6 761 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 SUGP1Q8IWZ8 645 aaKnown RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 PABPC3Q9H361 631 aaKnown RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 CFAP99D6REC4 459 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 IGF2BP3O00425 579 aaKnown RBP eCLIP20.99■□□□□ 0.95
RNF40-203ENST00000493683 ALDH1A1P00352 501 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 MYBP10242 640 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 PCSK1P29120 753 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 AARS2Q5JTZ9 985 aaKnown RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 CCDC126Q96EE4 140 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 FLT1P17948 1338 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 TRPM1Q7Z4N2 1603 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 EVPLLA8MZ36 301 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 RBP3P10745 1247 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 SCARF1Q14162 830 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 TERB1Q8NA31 727 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 PRMT7Q9NVM4 692 aaPredicted RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 SNAP23O00161 211 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 O00370 1275 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 PMS1P54277 932 aaKnown RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 HORMAD1Q86X24 394 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 CNBD2Q96M20 576 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 H2AFY2Q9P0M6 372 aaPredicted RBP20.99■□□□□ 0.95
RNF40-203ENST00000493683 PKP3Q9Y446 797 aa20.99■□□□□ 0.95
RNF40-203ENST00000493683 CSPG5O95196 566 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 SLC13A5Q86YT5 568 aaPredicted RBP20.98■□□□□ 0.95
RNF40-203ENST00000493683 CRAMP1Q96RY5 1269 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 CD274Q9NZQ7 290 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 MARCOQ9UEW3 520 aaPredicted RBP20.98■□□□□ 0.95
RNF40-203ENST00000493683 KANSL1LA0AUZ9 987 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 FKBP9O95302 570 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 ACOT2P49753 483 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 KRR1Q13601 381 aaKnown RBP20.98■□□□□ 0.95
RNF40-203ENST00000493683 FKBP9P1Q75LS8 142 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 P3H2Q8IVL5 708 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 AP4S1Q9Y587 144 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 CROCC2H7BZ55 1655 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 SUPT3HB4E1H0 165 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 PRR23D1E9PI22 279 aaPredicted RBP20.98■□□□□ 0.95
RNF40-203ENST00000493683 CST8O60676 142 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 ANXA9O76027 345 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 PRR23D2P0DMB1 279 aaPredicted RBP20.98■□□□□ 0.95
RNF40-203ENST00000493683 COBLL1Q53SF7 1204 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 APBB2Q92870 758 aa20.98■□□□□ 0.95
RNF40-203ENST00000493683 ARHGEF1Q92888 912 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms