RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 SHISA7A6NL88 538 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 CYB561D2O14569 222 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 SYT1P21579 422 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ID4P47928 161 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 TUFMP49411 452 aaKnown RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 VEPH1Q14D04 833 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 SV2CQ496J9 727 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ARHGAP15Q53QZ3 475 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 L1TD1Q5T7N2 865 aaKnown RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 NT5DC4Q86YG4 428 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 THEM5Q8N1Q8 247 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 TTC9BQ8N6N2 239 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 CSGALNACT1Q8TDX6 532 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 C2orf15Q8WU43 125 aaKnown RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ATRIPQ8WXE1 791 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 FAM3CQ92520 227 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 MSANTD3Q96H12 275 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ZNF560Q96MR9 790 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 CLIC6Q96NY7 704 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ACCSQ96QU6 501 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 SEPT5Q99719 369 aaPredicted RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 PYM1Q9BRP8 204 aaKnown RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ZCWPW1Q9H0M4 648 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
PTPRU-208ENST00000493601 MORC2Q9Y6X9 1032 aaPredicted RBP17.96■□□□□ 0.47
PTPRU-208ENST00000493601 NCANO14594 1321 aa17.96■□□□□ 0.46
PTPRU-208ENST00000493601 F5P12259 2224 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 MYMKA6NI61 221 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 ARNTLO00327 626 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 SOAT2O75908 522 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 ADSSP30520 456 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 PNPLA4P41247 253 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-208ENST00000493601 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
PTPRU-208ENST00000493601 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 MTAPQ13126 283 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 FZD5Q13467 585 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 PPP2R5DQ14738 602 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 C1orf228Q6PIY5 440 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 CRELD2Q6UXH1 353 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-208ENST00000493601 ERMP1Q7Z2K6 904 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 DNAJB7Q7Z6W7 309 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-208ENST00000493601 EFCAB13Q8IY85 973 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 ZNF687Q8N1G0 1237 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 SUMF1Q8NBK3 374 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 DNAJC19Q96DA6 116 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 GCNAQ96QF7 691 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 FAM126AQ9BYI3 521 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-208ENST00000493601 IKZF4Q9H2S9 585 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 CHRDQ9H2X0 955 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 OLFML3Q9NRN5 406 aa17.95■□□□□ 0.46
PTPRU-208ENST00000493601 CHADO15335 359 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 GCNT3O95395 438 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 GABRR2P28476 465 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 STAT6P42226 847 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 FCHO2Q0JRZ9 810 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 ALCAMQ13740 583 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 MGAT5BQ3V5L5 792 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 STXBP5Q5T5C0 1151 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 GAREM2Q75VX8 874 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 ARID3BQ8IVW6 561 aaPredicted RBP17.94■□□□□ 0.46
PTPRU-208ENST00000493601 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 ZBTB44Q8NCP5 570 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 SPPL2BQ8TCT7 592 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
PTPRU-208ENST00000493601 FAM213AQ9BRX8 229 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 ATXN3LQ9H3M9 355 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 TBC1D7Q9P0N9 293 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 PCDHB13Q9Y5F0 798 aa17.94■□□□□ 0.46
PTPRU-208ENST00000493601 KPNA7A9QM74 516 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 DPYSL4O14531 572 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 IDEP14735 1019 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 CDC25CP30307 473 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 KCNA1Q09470 495 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 TAF12Q16514 161 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 GPR158Q5T848 1215 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 WSCD1Q658N2 575 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 FAM173BQ6P4H8 233 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 MAMSTRQ6ZN01 415 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
PTPRU-208ENST00000493601 SYCP3Q8IZU3 236 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 NELL1Q92832 810 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 RSPRY1Q96DX4 576 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 LPIN3Q9BQK8 851 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 OBP2AQ9NY56 170 aa17.93■□□□□ 0.46
PTPRU-208ENST00000493601 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 LDHAP00338 332 aaKnown RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 ATF6P18850 670 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 GARTP22102 1010 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 CCNE1P24864 410 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 KPNA1P52294 538 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 TFAMQ00059 246 aaKnown RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 SLC39A14Q15043 492 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 TSSK4Q6SA08 328 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 SECISBP2LQ93073 1101 aaKnown RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 SAAL1Q96ER3 474 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms