RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PABPC1LQ4VXU2 614 aaKnown RBP3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 COBLL1Q53SF7 1204 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 METTL24Q5JXM2 366 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 EMC10Q5UCC4 262 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 DRICH1Q6PGQ1 229 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCDC149Q6ZUS6 474 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 DAAM2Q86T65 1068 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM83AQ86UY5 434 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 OR10H5Q8NGA6 315 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 IL31RAQ8NI17 732 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 LINC00476Q8WZB0 136 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 TTC17Q96AE7 1141 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM167AQ96KS9 214 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 WDCPQ9H6R7 721 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM204AQ9H8W3 233 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 AKIP1Q9NQ31 210 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 SIDT1Q9NXL6 827 aaKnown RBP3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FEZ2Q9UHY8 353 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 HDAC5Q9UQL6 1122 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM50BQ9Y247 325 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 USP19O94966 1318 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 DRGXA6NNA5 263 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 E9PLN8 166 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 LEFTY2O00292 366 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 KIAA0391O15091 583 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 FRS3O43559 492 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 NDUFA10O95299 355 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 KRT18P05783 430 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 MYL1P05976 194 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 HLA-DOAP06340 250 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 HDCP19113 662 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZFP36P26651 326 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 PEX2P28328 305 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ARFIP2P53365 341 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM193AP78312 1265 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 MXRA7P84157 204 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 EXOSC9Q06265 439 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 UBE4AQ14139 1066 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 FGL2Q14314 439 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 KIF22Q14807 665 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 UBXN2BQ14CS0 331 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 VPS72Q15906 364 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 KIAA0753Q2KHM9 967 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCDC93Q567U6 631 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ATXN7L2Q5T6C5 722 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM102AQ5T9C2 384 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ABHD17BQ5VST6 288 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 IL31Q6EBC2 164 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 GDF7Q7Z4P5 450 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZNF384Q8TF68 577 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 LRTOMTQ8WZ04 291 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 TFAP2CQ92754 450 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCDC136Q96JN2 1154 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 VKORC1Q9BQB6 163 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 NAA15Q9BXJ9 866 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 MRPS18AQ9NVS2 196 aaKnown RBP3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 JKAMPQ9P055 326 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 PCDHA6Q9UN73 950 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 AGAP1Q9UPQ3 857 aa3.66□□□□□ -1.82
HMGB1P30-201ENST00000492455 ANO9A1A5B4 782 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 CDHR4A6H8M9 788 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 AHRRA9YTQ3 701 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 PRR5-ARHGAP8B1AHC4 643 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 GOLIM4O00461 696 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 TBX3O15119 743 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 NCR1O76036 304 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 HAUS5O94927 633 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 POMCP01189 267 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 IGLV2-14P01704 120 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 KITP10721 976 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 MTHFD1P11586 935 aaKnown RBP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 MYF5P13349 255 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHKG2P15735 406 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 APOBEC3AP31941 199 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 PHKA1P46020 1223 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 PIK3CGP48736 1102 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 NEK3P51956 506 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 CHN2P52757 468 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 NOMO3P69849 1222 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 GPSM2P81274 684 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 NHLH1Q02575 133 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 FOXI1Q12951 378 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 MPP3Q13368 585 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 SAFBQ15424 915 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 CCDC157Q569K6 752 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 NOMO2Q5JPE7 1267 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 SYCP2LQ5T4T6 812 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 RNF220Q5VTB9 566 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 ZNF365Q70YC5 407 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 KRT78Q8N1N4 520 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 FAM98AQ8NCA5 519 aaKnown RBP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 TMIEQ8NEW7 156 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 MAML1Q92585 1016 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 KLHL32Q96NJ5 620 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 P2RX7Q99572 595 aaKnown RBP3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 APOL5Q9BWW9 433 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 TEX101Q9BY14 249 aa3.65□□□□□ -1.83
HMGB1P30-201ENST00000492455 TRIM54Q9BYV2 358 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms