RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 PSMG2Q969U7 264 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 CLDN23Q96B33 292 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 RSPRY1Q96DX4 576 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 SAAL1Q96ER3 474 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 ACCSQ96QU6 501 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 SEPT5Q99719 369 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 FAM213AQ9BRX8 229 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 FGFBP2Q9BYJ0 223 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 GPR88Q9GZN0 384 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 OLFML3Q9NRN5 406 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 FBXO4Q9UKT5 387 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 NDRG2Q9UN36 371 aaKnown RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 ASB3Q9Y575 518 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 PIAS3Q9Y6X2 628 aa14.74□□□□□ -0.05
COL6A3-211ENST00000491233 MORC2Q9Y6X9 1032 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 RIF1Q5UIP0 2472 aaKnown RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 PTPRZ1P23471 2315 aaPredicted RBP14.74□□□□□ -0.05
COL6A3-211ENST00000491233 VPS13AQ96RL7 3174 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF638Q14966 1978 aaKnown RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 FRMD3A2A2Y4 597 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF263O14978 683 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ATF6P18850 670 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 RPS9P46781 194 aaKnown RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 TFAMQ00059 246 aaKnown RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 SLC39A14Q15043 492 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF528Q3MIS6 628 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 MGAT5BQ3V5L5 792 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 WSCD1Q658N2 575 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
COL6A3-211ENST00000491233 NT5DC4Q86YG4 428 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 MFSD6LQ8IWD5 586 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 PDILTQ8N807 584 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ZSWIM2Q8NEG5 633 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 LPIN3Q9BQK8 851 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 MKNK1Q9BUB5 465 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 PANK2Q9BZ23 570 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 TRPV5Q9NQA5 729 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
COL6A3-211ENST00000491233 CFAP54Q96N23 3096 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 MAN2B1O00754 1011 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 STX6O43752 255 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 KINO60870 393 aaKnown RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 GABRR2P28476 465 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 NASPP49321 788 aaPredicted RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 CSTF1Q05048 431 aaKnown RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 FZD5Q13467 585 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 ALCAMQ13740 583 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 VEPH1Q14D04 833 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 STK38Q15208 465 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 GPR158Q5T848 1215 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 GAREM2Q75VX8 874 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 ITIH5Q86UX2 942 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 YAF2Q8IY57 180 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 SYCP3Q8IZU3 236 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 THEM5Q8N1Q8 247 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 FAM3CQ92520 227 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 E2F7Q96AV8 911 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 BORCS6Q96GS4 357 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 FAM84AQ96KN4 292 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 HINFPQ9BQA5 517 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 CBWD1Q9BRT8 395 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 BACH2Q9BYV9 841 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 ZSCAN16Q9H4T2 348 aaPredicted RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 PANK4Q9NVE7 773 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 ABI2Q9NYB9 513 aaPredicted RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 RBAKQ9NYW8 714 aaPredicted RBP14.72□□□□□ -0.05
COL6A3-211ENST00000491233 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
COL6A3-211ENST00000491233 GOLGA8IPA6NC78 632 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 GOLGA8JA6NMD2 632 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 KPNA7A9QM74 516 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 ARNTLO00327 626 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 PRPF6O94906 941 aaKnown RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 FGF19O95750 216 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 ITGB3P05106 788 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 GARTP22102 1010 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 PNPLA4P41247 253 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 TUFMP49411 452 aaKnown RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 CYP4F8P98187 520 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 ARHGAP15Q53QZ3 475 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 TSSK4Q6SA08 328 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 LRRTM3Q86VH5 581 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 GPIHBP1Q8IV16 184 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 ARID3BQ8IVW6 561 aaPredicted RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 ZNF687Q8N1G0 1237 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 SPPL2BQ8TCT7 592 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 CSGALNACT1Q8TDX6 532 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 NOC3LQ8WTT2 800 aaKnown RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 C2orf15Q8WU43 125 aaKnown RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 CHRDQ9H2X0 955 aa14.71□□□□□ -0.05
COL6A3-211ENST00000491233 PRMT8Q9NR22 394 aaPredicted RBP14.71□□□□□ -0.05
COL6A3-211ENST00000491233 GVINP1Q7Z2Y8 2422 aa14.71□□□□□ -0.06
COL6A3-211ENST00000491233 F5P12259 2224 aa14.7□□□□□ -0.06
COL6A3-211ENST00000491233 SLC38A8A6NNN8 435 aa14.7□□□□□ -0.06
COL6A3-211ENST00000491233 CHADO15335 359 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms