RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TMEM209Q96SK2 561 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 DNAJC25Q9H1X3 360 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 TRPV5Q9NQA5 729 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 HSFX1Q9UBD0 423 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 PCDHB13Q9Y5F0 798 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 PIAS3Q9Y6X2 628 aa21.31■■□□□ 1
SREBF1-216ENST00000490796 MYMKA6NI61 221 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 NRG2O14511 850 aaPredicted RBP21.3■■□□□ 1
SREBF1-216ENST00000490796 FOXK2Q01167 660 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 PPP2R5DQ14738 602 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 SV2CQ496J9 727 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 FAM173BQ6P4H8 233 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 NT5DC4Q86YG4 428 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 TMC8Q8IU68 726 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 NOC3LQ8WTT2 800 aaKnown RBP21.3■■□□□ 1
SREBF1-216ENST00000490796 PSMG2Q969U7 264 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 ZNF560Q96MR9 790 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 PCDHGA2Q9Y5H1 932 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 COL4A3Q01955 1670 aa21.3■■□□□ 1
SREBF1-216ENST00000490796 SOAT2O75908 522 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 LDHAP00338 332 aaKnown RBP21.29■■□□□ 1
SREBF1-216ENST00000490796 GABRR2P28476 465 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 KPNA1P52294 538 aaPredicted RBP21.29■■□□□ 1
SREBF1-216ENST00000490796 SMARCB1Q12824 385 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 L1TD1Q5T7N2 865 aaKnown RBP21.29■■□□□ 1
SREBF1-216ENST00000490796 GPR158Q5T848 1215 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 KIAA2013Q8IYS2 634 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 OR10T2Q8NGX3 314 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 C2orf15Q8WU43 125 aaKnown RBP21.29■■□□□ 1
SREBF1-216ENST00000490796 CACTINQ8WUQ7 758 aaKnown RBP21.29■■□□□ 1
SREBF1-216ENST00000490796 FAM213AQ9BRX8 229 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 LRRC3Q9BY71 257 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 PANK2Q9BZ23 570 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 ZCWPW1Q9H0M4 648 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 ZSCAN32Q9NX65 697 aa21.29■■□□□ 1
SREBF1-216ENST00000490796 ZNF292O60281 2723 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 OTOGLQ3ZCN5 2332 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 KPNA7A9QM74 516 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 PNPLA4P41247 253 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 TFAMQ00059 246 aaKnown RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 ALCAMQ13740 583 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 WSCD1Q658N2 575 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 ARID3BQ8IVW6 561 aaPredicted RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 DCP1BQ8IZD4 617 aaKnown RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 TTC9BQ8N6N2 239 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 SECISBP2LQ93073 1101 aaKnown RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 INTS4Q96HW7 963 aaKnown RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 IKZF4Q9H2S9 585 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 ZSCAN16Q9H4T2 348 aaPredicted RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 LMAN1LQ9HAT1 526 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 NCDNQ9UBB6 729 aa21.28■■□□□ 1
SREBF1-216ENST00000490796 R3HCC1Q9Y3T6 440 aaKnown RBP21.28■■□□□ 1
SREBF1-216ENST00000490796 CHADO15335 359 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 PPP1R37O75864 691 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 CDC25CP30307 473 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 ADSSP30520 456 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 CDR1P51861 262 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 TSPY1Q01534 308 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 MTAPQ13126 283 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 C1orf228Q6PIY5 440 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 CRELD2Q6UXH1 353 aaPredicted RBP21.27■■□□□ 1
SREBF1-216ENST00000490796 GPIHBP1Q8IV16 184 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 EFCAB13Q8IY85 973 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 SPPL2BQ8TCT7 592 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 DNAJC19Q96DA6 116 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 SAAL1Q96ER3 474 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 MSANTD3Q96H12 275 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 LPIN3Q9BQK8 851 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 IER2Q9BTL4 223 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 C8orf33Q9H7E9 229 aaPredicted RBP21.27■■□□□ 1
SREBF1-216ENST00000490796 PANK4Q9NVE7 773 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 ABI2Q9NYB9 513 aaPredicted RBP21.27■■□□□ 1
SREBF1-216ENST00000490796 GPR179Q6PRD1 2367 aa21.27■■□□□ 1
SREBF1-216ENST00000490796 CCNE1P24864 410 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 KCNA1Q09470 495 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 SLC39A14Q15043 492 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 STK38Q15208 465 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 STXBP5Q5T5C0 1151 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 TSSK4Q6SA08 328 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 GAREM2Q75VX8 874 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 GIPC2Q8TF65 315 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 USP28Q96RU2 1077 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 FAM126AQ9BYI3 521 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-216ENST00000490796 CHRDQ9H2X0 955 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 TMEM206Q9H813 350 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 OLFML3Q9NRN5 406 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 RBAKQ9NYW8 714 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-216ENST00000490796 AGAP1Q9UPQ3 857 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 SCN1AP35498 2009 aa21.26■□□□□ 0.99
SREBF1-216ENST00000490796 HUS1O60921 280 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 GARTP22102 1010 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 POLR2BP30876 1174 aaKnown RBP21.25■□□□□ 0.99
SREBF1-216ENST00000490796 NRLP54845 237 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 LRRC32Q14392 662 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 ARHGAP29Q52LW3 1261 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 STXBP4Q6ZWJ1 553 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 ERMP1Q7Z2K6 904 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 BRSK2Q8IWQ3 736 aa21.25■□□□□ 0.99
SREBF1-216ENST00000490796 CCDC65Q8IXS2 484 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms