RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PLSCR2Q9NRY7 297 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 DUSP12Q9UNI6 340 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 SMC3Q9UQE7 1217 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 USTQ9Y2C2 406 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 ZDHHC9Q9Y397 364 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 NUMBLQ9Y6R0 609 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 MIA3Q5JRA6 1907 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 SCN1AP35498 2009 aa6.3□□□□□ -1.4
CNOT9-207ENST00000489687 SMIM28A0A1B0GU29 152 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 EIF3CLB5ME19 914 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CFAP99D6REC4 459 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 K7ENM7 598 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PPEF2O14830 753 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 LZTS3O60299 673 aaPredicted RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 LRRN2O75325 713 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PRPF40AO75400 957 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TUBBP07437 444 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 MAPTP10636 758 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 NPR3P17342 541 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CEBPBP17676 345 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PLCG1P19174 1290 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FGFR3P22607 806 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PROZP22891 400 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FSHRP23945 695 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PRPHP41219 470 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 GRM5P41594 1212 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CD151P48509 253 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SLC12A3P55017 1021 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 ROR1Q01973 937 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CEBPZQ03701 1054 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TDGQ13569 410 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PDCD2Q16342 344 aaPredicted RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 UPP1Q16831 310 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SLC5A9Q2M3M2 681 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 RILPL1Q5EBL4 403 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 ARSHQ5FYA8 562 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PPM1LQ5SGD2 360 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 LILRA6Q6PI73 481 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SARM1Q6SZW1 724 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PARM1Q6UWI2 310 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 MPZL3Q6UWV2 235 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 USP49Q70CQ1 688 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CCDC186Q7Z3E2 898 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FRMD5Q7Z6J6 570 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 REXO1L1PQ8IX06 675 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 C10orf67Q8IYJ2 551 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TMEM161BQ8NDZ6 487 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 CMASQ8NFW8 434 aaPredicted RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FAM200AQ8TCP9 573 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 GPR152Q8TDT2 470 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 HNRNPLLQ8WVV9 542 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FGF14Q92915 247 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 EIF3CQ99613 913 aaKnown RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SH3GL3Q99963 347 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PRKD2Q9BZL6 878 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 MTRRQ9UBK8 725 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 PYCARDQ9ULZ3 195 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TNFSF13BQ9Y275 285 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TIMM13Q9Y5L4 95 aaPredicted RBP6.29□□□□□ -1.4
CNOT9-207ENST00000489687 SDK1Q7Z5N4 2213 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TICRRQ7Z2Z1 1910 aa6.29□□□□□ -1.4
CNOT9-207ENST00000489687 TPRP12270 2363 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 WDR27A2RRH5 827 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 ERICH4A6NGS2 130 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 A6NNZ2 444 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 H0YHG0 523 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 LAD1O00515 517 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 HNRNPDLO14979 420 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 GFRA3O60609 400 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 ADH1BP00325 375 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 DCNP07585 359 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 OR4Q2P0C623 313 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 MCF2P10911 925 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 PLS3P13797 630 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 MUTP22033 750 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 RFX1P22670 979 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 MARCKSP29966 332 aaPredicted RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 CREMQ03060 361 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 STRN3Q13033 797 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 PDIA5Q14554 519 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 SF3A1Q15459 793 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 TUBB8Q3ZCM7 444 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 FOXD4L5Q5VV16 416 aaPredicted RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
CNOT9-207ENST00000489687 CEP135Q66GS9 1140 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 SLC39A4Q6P5W5 647 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 LEKR1Q6ZMV7 388 aa6.28□□□□□ -1.4
CNOT9-207ENST00000489687 ASCL5Q7RTU5 278 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms