RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MAP3K10Q02779 954 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 DCTN2Q13561 401 aaKnown RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 TCHHL1Q5QJ38 904 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 RABGAP1LQ5R372 815 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 KAZNQ674X7 775 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 ARPINQ7Z6K5 226 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 CCDC110Q8TBZ0 833 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 KAT5Q92993 513 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 C6orf50Q9HD87 102 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 DDX43Q9NXZ2 648 aaKnown RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 TMEM247A6NEH6 219 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 E5RJQ4 531 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 G3V3G9 751 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 RARBP10826 455 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 SIX1Q15475 284 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 CCDC92Q53HC0 331 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 C6orf163Q5TEZ5 329 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 ZBED8Q8IZ13 594 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 MORC4Q8TE76 937 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 SAR1AQ9NR31 198 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 SELENONQ9NZV5 590 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 PCNTO95613 3336 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 PPM1KQ8N3J5 372 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 MANSC1Q9H8J5 431 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PLSCR1O15162 318 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 E2F6O75461 281 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 TSPY3P0CV98 308 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 TSPY8P0CW00 308 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 IVDP26440 423 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 SSTR3P32745 418 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 HOXD13P35453 343 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 NPEPPSP55786 919 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 JAM2P57087 298 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PDE1BQ01064 536 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 FOLH1Q04609 750 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 CYTH1Q15438 398 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 RAB3IL1Q8TBN0 382 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 RILPQ96NA2 401 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 NUP85Q9BW27 656 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 C10orf88Q9H8K7 445 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 NR3C1P04150 777 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PMLP29590 882 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 SLC5A2P31639 672 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 RGS2P41220 211 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 CD151P48509 253 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 UBAP2LQ14157 1087 aaKnown RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 PDK1Q15118 436 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 VPS72Q15906 364 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 ZNF568Q3ZCX4 644 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 UTS2BQ765I0 119 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 OLIG1Q8TAK6 271 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 GIPC3Q8TF64 312 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 DCUN1D5Q9BTE7 237 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 MECRQ9BV79 373 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 SPZ1Q9BXG8 430 aa17.03■□□□□ 0.32
MCF2L-229ENST00000488765 UBE2TQ9NPD8 197 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-229ENST00000488765 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 ALAS1P13196 640 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 ITIH2P19823 946 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 CRABP2P29373 138 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 PPP6R3Q5H9R7 873 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-229ENST00000488765 ACAD11Q709F0 780 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 UNC45AQ9H3U1 944 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 TSC22D4Q9Y3Q8 395 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 XPO1O14980 1071 aaKnown RBP17.02■□□□□ 0.32
MCF2L-229ENST00000488765 IFNB1P01574 187 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 SCNN1DP51172 638 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 GAD2Q05329 585 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 TMEM214Q6NUQ4 689 aaKnown RBP17.02■□□□□ 0.32
MCF2L-229ENST00000488765 TMPRSS6Q8IU80 811 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 GALNT4Q8N4A0 578 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 TMIGD2Q96BF3 282 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 FAM81BQ96LP2 452 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 MTMR9Q96QG7 549 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 OSBPL8Q9BZF1 889 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 ANLNQ9NQW6 1124 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms