RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KIAA0319LQ8IZA0 1049 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 TMEM132CQ8N3T6 1108 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 OR56A1Q8NGH5 318 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SLC9A6Q92581 669 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SLC35A4Q96G79 324 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 C1orf43Q9BWL3 253 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 C11orf54Q9H0W9 315 aaPredicted RBP4.1□□□□□ -1.75
CD46-215ENST00000488596 TMEM60Q9H2L4 133 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 GSTO2Q9H4Y5 243 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ARNT2Q9HBZ2 717 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 SLAMF7Q9NQ25 335 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 KLHL11Q9NVR0 708 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 CPA4Q9UI42 421 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PCDHA6Q9UN73 950 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 L1RE1Q9UN81 338 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 ATP11BQ9Y2G3 1177 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 PCDHGB6Q9Y5F9 930 aa4.1□□□□□ -1.75
CD46-215ENST00000488596 A0A088AWK7 358 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 PROB1E7EW31 1015 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 APAF1O14727 1248 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 MGST3O14880 152 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 C1QL1O75973 258 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 POMCP01189 267 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 AHSGP02765 367 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 CD1AP06126 327 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 SNRPA1P09661 255 aaKnown RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 SLC6A2P23975 617 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 PRDX5P30044 214 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 SLC6A4P31645 630 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 RARRES1P49788 294 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 AGFG1P52594 562 aaKnown RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 RAB1AP62820 205 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 FOXF2Q12947 444 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 FGL2Q14314 439 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 CNN3Q15417 329 aaKnown RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 RNF220Q5VTB9 566 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 TSHZ3Q63HK5 1081 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 SEM1Q6ZVN7 128 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 MAPKAPK5Q8IW41 473 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 TNPO1Q92973 898 aaKnown RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 SARGQ9BW04 601 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 APOL5Q9BWW9 433 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 ALOXE3Q9BYJ1 711 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 BHMT2Q9H2M3 363 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 FAM204AQ9H8W3 233 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 CHST12Q9NRB3 414 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 FBXO34Q9NWN3 711 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 SLC45A2Q9UMX9 530 aa4.09□□□□□ -1.75
CD46-215ENST00000488596 COL3A1P02461 1466 aaPredicted RBP4.09□□□□□ -1.75
CD46-215ENST00000488596 CCDC194A0A1B0GVG4 234 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 CCDC78A2IDD5 438 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 CFAP69A5D8W1 941 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MYADML2A6NDP7 307 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 CAPN8A6NHC0 703 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 PRSS29PA6NIE9 313 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 PJA2O43164 708 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 TEX33O43247 280 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 RBMXL2O75526 392 aaKnown RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 USP19O94966 1318 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 PRSS23O95084 383 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ARIH2O95376 493 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ZBED1O96006 694 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MYL1P05976 194 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 KITP10721 976 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MTHFD1P11586 935 aaKnown RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 TRIM27P14373 513 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 RHCEP18577 417 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 HDCP19113 662 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 FDXRP22570 491 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 RHDQ02161 417 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 DACT2Q5SW24 774 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 IL31Q6EBC2 164 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ARMC6Q6NXE6 501 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 Q6ZNX1 250 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MED25Q71SY5 747 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MAEAQ7L5Y9 396 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 SRGAP1Q7Z6B7 1085 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ARHGEF25Q86VW2 580 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 FAM90A1Q86YD7 464 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 IL17RDQ8NFM7 739 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ZNF384Q8TF68 577 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 ARHGEF17Q96PE2 2063 aaPredicted RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 ZSWIM1Q9BR11 485 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 DUSP26Q9BV47 211 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 MRPL46Q9H2W6 279 aaKnown RBP4.08□□□□□ -1.76
CD46-215ENST00000488596 ATP6V0A4Q9HBG4 840 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 KIAA1586Q9HCI6 787 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 DDX21Q9NR30 783 aaKnown RBP eCLIP4.08□□□□□ -1.76
CD46-215ENST00000488596 SEMA4GQ9NTN9 838 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 FOXJ2Q9P0K8 574 aa4.08□□□□□ -1.76
CD46-215ENST00000488596 LRRC3CA6NJW4 275 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 FAM227AF5H4B4 570 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 NOMO3P69849 1222 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 MXRA7P84157 204 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 NHLH1Q02575 133 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 OCA2Q04671 838 aa4.07□□□□□ -1.76
CD46-215ENST00000488596 EXOSC9Q06265 439 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms