RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ZCWPW1Q9H0M4 648 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 SEMA4AQ9H3S1 761 aa24.4■■□□□ 1.5
PTPN4-211ENST00000488279 MRPS17Q9Y2R5 130 aaKnown RBP24.4■■□□□ 1.5
PTPN4-211ENST00000488279 A0A1W2PRU2 124 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 NCAM2O15394 837 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 PNPLA4P41247 253 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 WSCD1Q658N2 575 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 VITQ6UXI7 678 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 STXBP4Q6ZWJ1 553 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 TMC8Q8IU68 726 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 BRSK2Q8IWQ3 736 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 DEPDC1BQ8WUY9 529 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 PSMG2Q969U7 264 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 ZNF560Q96MR9 790 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 TNMDQ9H2S6 317 aa24.39■■□□□ 1.49
PTPN4-211ENST00000488279 SPATA6Q9NWH7 488 aaPredicted RBP24.39■■□□□ 1.49
PTPN4-211ENST00000488279 RBAKQ9NYW8 714 aaPredicted RBP24.39■■□□□ 1.49
PTPN4-211ENST00000488279 EXTL3O43909 919 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 SOAT2O75908 522 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 PRPF6O94906 941 aaKnown RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 FGF19O95750 216 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 SP9P0CG40 484 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 PDIA4P13667 645 aaKnown RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 GDI1P31150 447 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 MAGEA9P43362 315 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 SMARCB1Q12824 385 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 MGAT5BQ3V5L5 792 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 MFSD6LQ8IWD5 586 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 TTC9BQ8N6N2 239 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 ZSWIM2Q8NEG5 633 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 FAM200AQ8TCP9 573 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 C2orf15Q8WU43 125 aaKnown RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 SEPT5Q99719 369 aaPredicted RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 FGFBP2Q9BYJ0 223 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 CUEDC2Q9H467 287 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 ZNF334Q9HCZ1 680 aaPredicted RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 TRPV5Q9NQA5 729 aa24.38■■□□□ 1.49
PTPN4-211ENST00000488279 PTPRZ1P23471 2315 aaPredicted RBP24.38■■□□□ 1.49
PTPN4-211ENST00000488279 FRYLO94915 3013 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 MAN2B1O00754 1011 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 AMPD3Q01432 767 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 VEPH1Q14D04 833 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 ZC3H14Q6PJT7 736 aaKnown RBP24.37■■□□□ 1.49
PTPN4-211ENST00000488279 KCNG4Q8TDN1 519 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 NOC3LQ8WTT2 800 aaKnown RBP24.37■■□□□ 1.49
PTPN4-211ENST00000488279 CBWD1Q9BRT8 395 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 ATXN3LQ9H3M9 355 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 PCIF1Q9H4Z3 704 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 KBTBD4Q9NVX7 518 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 AGAP1Q9UPQ3 857 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 R4GN57 208 aa24.37■■□□□ 1.49
PTPN4-211ENST00000488279 GOLGA8IPA6NC78 632 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 GOLGA8JA6NMD2 632 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 HEPACAM2A8MVW5 462 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 ZNF263O14978 683 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 LAMTOR5O43504 91 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 YEATS4O95619 227 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 HSP90AA1P07900 732 aaKnown RBP24.36■■□□□ 1.49
PTPN4-211ENST00000488279 TARSP26639 723 aaKnown RBP24.36■■□□□ 1.49
PTPN4-211ENST00000488279 POLR2BP30876 1174 aaKnown RBP24.36■■□□□ 1.49
PTPN4-211ENST00000488279 WNT7BP56706 349 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 DCP1BQ8IZD4 617 aaKnown RBP24.36■■□□□ 1.49
PTPN4-211ENST00000488279 ADSSL1Q8N142 457 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 IQUBQ8NA54 791 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 CLDN23Q96B33 292 aa24.36■■□□□ 1.49
PTPN4-211ENST00000488279 KIAA0391O15091 583 aaKnown RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 CUTAO60888 179 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 LMNAP02545 664 aaKnown RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 ITGB3P05106 788 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 GABRR2P28476 465 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 CDR1P51861 262 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 E2F4Q16254 413 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 TAF12Q16514 161 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 ARHGAP15Q53QZ3 475 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 FOXD4L5Q5VV16 416 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 GAREM2Q75VX8 874 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 LRRTM3Q86VH5 581 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 HSCBQ8IWL3 235 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 YAF2Q8IY57 180 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 MAML2Q8IZL2 1156 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 CSGALNACT2Q8N6G5 542 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 C1orf127Q8N9H9 656 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 SPPL2BQ8TCT7 592 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 FOXD4L4Q8WXT5 416 aaPredicted RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 DHX58Q96C10 678 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 TRIM9Q9C026 710 aa24.35■■□□□ 1.49
PTPN4-211ENST00000488279 RIF1Q5UIP0 2472 aaKnown RBP24.35■■□□□ 1.49
PTPN4-211ENST00000488279 RPS9P46781 194 aaKnown RBP24.34■■□□□ 1.49
PTPN4-211ENST00000488279 TSPY1Q01534 308 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 ARID3BQ8IVW6 561 aaPredicted RBP24.34■■□□□ 1.49
PTPN4-211ENST00000488279 GPD1LQ8N335 351 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 LRRC52Q8N7C0 313 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 LPIN3Q9BQK8 851 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 PDE11AQ9HCR9 933 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 FBXO4Q9UKT5 387 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 ITGA11Q9UKX5 1188 aa24.34■■□□□ 1.49
PTPN4-211ENST00000488279 HUS1O60921 280 aa24.33■■□□□ 1.49
PTPN4-211ENST00000488279 HAPLN1P10915 354 aaPredicted RBP24.33■■□□□ 1.49
PTPN4-211ENST00000488279 RBP5P82980 135 aa24.33■■□□□ 1.49
PTPN4-211ENST00000488279 ZNF528Q3MIS6 628 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms