RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ZBTB42B2RXF5 422 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 ABLIM1O14639 778 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 TLR3O15455 904 aaKnown RBP27.64■■■□□ 2.02
HLA-C-208ENST00000487245 MMP8P22894 467 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 MARK3P27448 753 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 TAS2R40P59535 323 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 SPRED3Q2MJR0 410 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 DLK2Q6UY11 383 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 FASTKD5Q7L8L6 764 aaKnown RBP27.64■■■□□ 2.02
HLA-C-208ENST00000487245 OSBPL8Q9BZF1 889 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 MROH8Q9H579 483 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 SAMD15Q9P1V8 674 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 RBPJLQ9UBG7 517 aa27.64■■■□□ 2.02
HLA-C-208ENST00000487245 TTLL13PA6NNM8 815 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 ACKR2O00590 384 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 HBP1O60381 514 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 PROZP22891 400 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 XRCC4Q13426 336 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 LONRF1Q17RB8 773 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 HSDL1Q3SXM5 330 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 TMEM35BQ8NCS4 154 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 ARHGEF2Q92974 986 aaKnown RBP27.64■■■□□ 2.01
HLA-C-208ENST00000487245 SPATA33Q96N06 139 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 KLC4Q9NSK0 619 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 NINJ2Q9NZG7 142 aa27.64■■■□□ 2.01
HLA-C-208ENST00000487245 SBF1O95248 1867 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 ACSL3O95573 720 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 PGK2P07205 417 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 ADCY8P40145 1251 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 MYL6P60660 151 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 TAP1Q03518 808 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 CCDC62Q6P9F0 684 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 MTMR12Q9C0I1 747 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 FZD8Q9H461 694 aa27.63■■■□□ 2.01
HLA-C-208ENST00000487245 TNNC2P02585 160 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 LMNB2Q03252 620 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 C2CD6Q53TS8 623 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 LLGL2Q6P1M3 1020 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 CCDC50Q8IVM0 306 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 FAM212AQ96EL1 285 aa27.62■■■□□ 2.01
HLA-C-208ENST00000487245 B4GALT4O60513 344 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 LLGL1Q15334 1064 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 ATF7IP2Q5U623 682 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 DRICH1Q6PGQ1 229 aaPredicted RBP27.61■■■□□ 2.01
HLA-C-208ENST00000487245 VSTM1Q6UX27 236 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 ZNF365Q70YC5 407 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 LRRC71Q8N4P6 559 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 ANKRD36BP1Q96IX9 119 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 PTPRHQ9HD43 1115 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 CISHQ9NSE2 258 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 OAS1P00973 400 aaKnown RBP27.61■■■□□ 2.01
HLA-C-208ENST00000487245 ABHD2P08910 425 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 TMEM191BP0C7N4 346 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 KLRC2P26717 231 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 LRRC38Q5VT99 294 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 RHPN2Q8IUC4 686 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 RCOR2Q8IZ40 523 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 CCHCR1Q8TD31 782 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 FAXDC2Q96IV6 333 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 CLMNQ96JQ2 1002 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 TXNRD2Q9NNW7 524 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 PCDHGC3Q9UN70 934 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 ACTL7BQ9Y614 415 aa27.61■■■□□ 2.01
HLA-C-208ENST00000487245 TMEM191CA6NGB0 347 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 VGLL3A8MV65 326 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 IL18RAPO95256 599 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 KYNUQ16719 465 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 TRIM50Q86XT4 487 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 RBM41Q96IZ5 413 aaKnown RBP27.6■■■□□ 2.01
HLA-C-208ENST00000487245 CEP83Q9Y592 693 aa27.6■■■□□ 2.01
HLA-C-208ENST00000487245 ASB14A6NK59 587 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 VIMP08670 466 aaKnown RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 HOXC6P09630 235 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 EIF4BP23588 611 aaKnown RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 CDH5P33151 784 aaPredicted RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 GTF2A1P52655 376 aaPredicted RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TTLL4Q14679 1199 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 STAT4Q14765 748 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 Q3C1V9 767 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 CCDC38Q502W7 563 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 HIBCHQ6NVY1 386 aaPredicted RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 FUKQ8N0W3 1084 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 SHCBP1Q8NEM2 672 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TMEM120BA0PK00 339 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 O00370 1275 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 PTPN7P35236 360 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TFAMQ00059 246 aaKnown RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 POU5F1BQ06416 359 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TRIP13Q15645 432 aaPredicted RBP27.59■■■□□ 2.01
HLA-C-208ENST00000487245 ZNF699Q32M78 642 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 IZUMO3Q5VZ72 239 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 HEMGNQ9BXL5 484 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 NFKBIZQ9BYH8 718 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 SLC12A4Q9UP95 1085 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TNFSF13BQ9Y275 285 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 USTQ9Y2C2 406 aa27.59■■■□□ 2.01
HLA-C-208ENST00000487245 TXNP10599 105 aaKnown RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 SSR1P43307 286 aaKnown RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 TTLL12Q14166 644 aaPredicted RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 DNAJC24Q6P3W2 148 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms