RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 TUBB3Q13509 450 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 ZNF551Q7Z340 670 aaPredicted RBP4.92□□□□□ -1.62
RC3H1-205ENST00000484867 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 NRG4Q8WWG1 115 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 FKBP10Q96AY3 582 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 SLC2A13Q96QE2 648 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 IMPG2Q9BZV3 1241 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 PCDHB1Q9Y5F3 818 aa4.92□□□□□ -1.62
RC3H1-205ENST00000484867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.92□□□□□ -1.62
RC3H1-205ENST00000484867 CYP2D7A0A087X1C5 515 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 RGS19P49795 217 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 LINC00205P59089 165 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 CDC42EP1Q00587 391 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 BMPR2Q13873 1038 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 DAZAP2Q15038 168 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-205ENST00000484867 PRAMEF17Q5VTA0 474 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 TBC1D5Q92609 795 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 RAB24Q969Q5 203 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 TMX3Q96JJ7 454 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 MRGPRX4Q96LA9 322 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 TRIB1Q96RU8 372 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 VPS16Q9H269 839 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 TUBA8Q9NY65 449 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-205ENST00000484867 INTUQ9ULD6 942 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 CNTNAP2Q9UHC6 1331 aa4.91□□□□□ -1.62
RC3H1-205ENST00000484867 SMIM35A0A1B0GVV1 85 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 LOC105371045A0A1W2PR82 267 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 H3BNC9 293 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 BRINP1O60477 761 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 EYA4O95677 639 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
RC3H1-205ENST00000484867 ZNF280AP59817 542 aaPredicted RBP4.9□□□□□ -1.63
RC3H1-205ENST00000484867 FAPQ12884 760 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 PLAC9Q5JTB6 97 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 GALNT16Q8N428 558 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 AFAP1L2Q8N4X5 818 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 UBR7Q8N806 425 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 SLC17A8Q8NDX2 589 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 SSH1Q8WYL5 1049 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 HMCESQ96FZ2 354 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 DMRTA2Q96SC8 542 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 PACSIN1Q9BY11 444 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 ETAA1Q9NY74 926 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 NR2E3Q9Y5X4 410 aa4.9□□□□□ -1.63
RC3H1-205ENST00000484867 ANXA1P04083 346 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 FAM163BP0C2L3 166 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 NDUFV1P49821 464 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 ZNF134P52741 427 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 POLGP54098 1239 aaPredicted RBP4.89□□□□□ -1.63
RC3H1-205ENST00000484867 ERVK-21P61565 698 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 STAT4Q14765 748 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 CATSPERGQ6ZRH7 1159 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 UBXN4Q92575 508 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 AHCYL2Q96HN2 611 aaKnown RBP4.89□□□□□ -1.63
RC3H1-205ENST00000484867 ZC3H10Q96K80 434 aaKnown RBP4.89□□□□□ -1.63
RC3H1-205ENST00000484867 SMOC2Q9H3U7 446 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 ARHGEF3Q9NR81 526 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 SH3BP4Q9P0V3 963 aa4.89□□□□□ -1.63
RC3H1-205ENST00000484867 F5H697 171 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 K7ESF4 209 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 ENPP3O14638 875 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 TRIAP1O43715 76 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 SGTAO43765 313 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 PRKD3O94806 890 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 CCKARP32238 428 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 TLE1Q04724 770 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 TBCCQ15814 346 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 ZNF260Q3ZCT1 412 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 AARS2Q5JTZ9 985 aaKnown RBP4.88□□□□□ -1.63
RC3H1-205ENST00000484867 LHFPL2Q6ZUX7 228 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 CAMKK2Q96RR4 588 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 ACTRT3Q9BYD9 372 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 TPSD1Q9BZJ3 242 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 SERHLQ9NQF3 203 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 TDP1Q9NUW8 608 aa4.88□□□□□ -1.63
RC3H1-205ENST00000484867 H0YIZ8 118 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 TOB1P50616 345 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-205ENST00000484867 TCF15Q12870 199 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 RSPH3Q86UC2 560 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 C8orf58Q8NAV2 365 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 SCAMP4Q969E2 229 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 SMOQ99835 787 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 EBF3Q9H4W6 596 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 MRPS18AQ9NVS2 196 aaKnown RBP4.87□□□□□ -1.63
RC3H1-205ENST00000484867 DLL3Q9NYJ7 618 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 PCDHA13Q9Y5I0 950 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 SHROOM4Q9ULL8 1493 aa4.87□□□□□ -1.63
RC3H1-205ENST00000484867 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 KCNU1A8MYU2 1149 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 PRR23D1E9PI22 279 aaPredicted RBP4.86□□□□□ -1.63
RC3H1-205ENST00000484867 POLRMTO00411 1230 aaKnown RBP4.86□□□□□ -1.63
RC3H1-205ENST00000484867 PRR23D2P0DMB1 279 aaPredicted RBP4.86□□□□□ -1.63
RC3H1-205ENST00000484867 SNHG28P0DPA3 235 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 GYS2P54840 703 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 RABEP1Q15276 862 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 TAF2Q6P1X5 1199 aa4.86□□□□□ -1.63
RC3H1-205ENST00000484867 KLHDC4Q8TBB5 520 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms