RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 LRRC52Q8N7C0 313 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 ATAD1Q8NBU5 361 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 SPATA18Q8TC71 538 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 KCNG4Q8TDN1 519 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 IRF7Q92985 503 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 PYM1Q9BRP8 204 aaKnown RBP21.42■■□□□ 1.02
HPS4-213ENST00000483631 TRMT61BQ9BVS5 477 aaKnown RBP21.42■■□□□ 1.02
HPS4-213ENST00000483631 TRIM9Q9C026 710 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 LTB4R2Q9NPC1 389 aa21.42■■□□□ 1.02
HPS4-213ENST00000483631 RBAKQ9NYW8 714 aaPredicted RBP21.42■■□□□ 1.02
HPS4-213ENST00000483631 MRPS17Q9Y2R5 130 aaKnown RBP21.42■■□□□ 1.02
HPS4-213ENST00000483631 NUP210Q8TEM1 1887 aaPredicted RBP21.41■■□□□ 1.02
HPS4-213ENST00000483631 EIF3DO15371 548 aaKnown RBP eCLIP21.41■■□□□ 1.02
HPS4-213ENST00000483631 NCAM2O15394 837 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 FRMD5Q7Z6J6 570 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 SHKBP1Q8TBC3 707 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 SPPL2BQ8TCT7 592 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 BCO2Q9BYV7 579 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 TFIP11Q9UBB9 837 aaKnown RBP21.41■■□□□ 1.02
HPS4-213ENST00000483631 ITGA11Q9UKX5 1188 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 PATJQ8NI35 1801 aa21.41■■□□□ 1.02
HPS4-213ENST00000483631 MYO15AQ9UKN7 3530 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 MAN2B1O00754 1011 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 ZSCAN22P10073 491 aaPredicted RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 WEE1P30291 646 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 MLLT6P55198 1093 aaPredicted RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 TFAMQ00059 246 aaKnown RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 SURF1Q15526 300 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 TEAD2Q15562 447 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 ZNF852Q6ZMS4 543 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 DNAJB7Q7Z6W7 309 aaPredicted RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 MFSD6LQ8IWD5 586 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 DCP1BQ8IZD4 617 aaKnown RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 GPD1LQ8N335 351 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 ZSCAN18Q8TBC5 510 aaPredicted RBP21.4■■□□□ 1.02
HPS4-213ENST00000483631 CLDN23Q96B33 292 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 SAAL1Q96ER3 474 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 ZSWIM3Q96MP5 696 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 TMEM209Q96SK2 561 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 CBWD1Q9BRT8 395 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 BRD9Q9H8M2 597 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 ZMYM5Q9UJ78 669 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 SLC27A5Q9Y2P5 690 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 COL4A2P08572 1712 aa21.4■■□□□ 1.02
HPS4-213ENST00000483631 NRG2O14511 850 aaPredicted RBP21.39■■□□□ 1.01
HPS4-213ENST00000483631 PRPF6O94906 941 aaKnown RBP21.39■■□□□ 1.01
HPS4-213ENST00000483631 F13A1P00488 732 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 HSP90AA1P07900 732 aaKnown RBP21.39■■□□□ 1.01
HPS4-213ENST00000483631 GLULP15104 373 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 RPS9P46781 194 aaKnown RBP21.39■■□□□ 1.01
HPS4-213ENST00000483631 VEPH1Q14D04 833 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 SLC39A12Q504Y0 691 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 WSCD1Q658N2 575 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 ZC3H14Q6PJT7 736 aaKnown RBP21.39■■□□□ 1.01
HPS4-213ENST00000483631 SHC4Q6S5L8 630 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 VITQ6UXI7 678 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 TPRG1Q6ZUI0 275 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 ASCL5Q7RTU5 278 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 TMEM86AQ8N2M4 240 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 C1orf127Q8N9H9 656 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 FGFBP2Q9BYJ0 223 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 KIAA1586Q9HCI6 787 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 GDAP2Q9NXN4 497 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 DENND4CQ5VZ89 1909 aa21.39■■□□□ 1.01
HPS4-213ENST00000483631 GVINP1Q7Z2Y8 2422 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 UBE4BO95155 1302 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 A0A1W2PRU2 124 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 FAM170BA6NMN3 283 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 POLR2BP30876 1174 aaKnown RBP21.38■■□□□ 1.01
HPS4-213ENST00000483631 WNT7BP56706 349 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 SNRPFP62306 86 aaKnown RBP21.38■■□□□ 1.01
HPS4-213ENST00000483631 UBXN2BQ14CS0 331 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 NFE2Q16621 373 aaPredicted RBP21.38■■□□□ 1.01
HPS4-213ENST00000483631 ZNF528Q3MIS6 628 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 CXorf38Q8TB03 319 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 LEO1Q8WVC0 666 aaPredicted RBP21.38■■□□□ 1.01
HPS4-213ENST00000483631 MSANTD3Q96H12 275 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 SLITRK6Q9H5Y7 841 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 ZNF334Q9HCZ1 680 aaPredicted RBP21.38■■□□□ 1.01
HPS4-213ENST00000483631 HEBP1Q9NRV9 189 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 OBP2AQ9NY56 170 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 AGAP1Q9UPQ3 857 aa21.38■■□□□ 1.01
HPS4-213ENST00000483631 TICRRQ7Z2Z1 1910 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ZNF233A6NK53 670 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ITGB3P05106 788 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 GJA1P17302 382 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ASIC1P78348 528 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 RBP5P82980 135 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 TSPY1Q01534 308 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ARHGAP15Q53QZ3 475 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 C1orf228Q6PIY5 440 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 GAREM2Q75VX8 874 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 EPM2AIP1Q7L775 607 aaPredicted RBP21.37■■□□□ 1.01
HPS4-213ENST00000483631 TTC9BQ8N6N2 239 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ZSWIM2Q8NEG5 633 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 ZNF507Q8TCN5 953 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 DHX58Q96C10 678 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 SEPT5Q99719 369 aaPredicted RBP21.37■■□□□ 1.01
HPS4-213ENST00000483631 ACBD6Q9BR61 282 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms