RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 HTR3DQ70Z44 454 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 POLNQ7Z5Q5 900 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 PPP1R32Q7Z5V6 425 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 CIR1Q86X95 450 aaPredicted RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
UPF3A-207ENST00000481131 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 DNAJC5GQ8N7S2 189 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 MIEF2Q96C03 454 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 ZNF518BQ9C0D4 1074 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 VPS11Q9H270 941 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 CLCA2Q9UQC9 943 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 PLEKHM1Q9Y4G2 1056 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 MRC2Q9UBG0 1479 aa6.32□□□□□ -1.4
UPF3A-207ENST00000481131 WDR62O43379 1518 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 B8ZZF3 427 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 F5H423 210 aaPredicted RBP6.31□□□□□ -1.4
UPF3A-207ENST00000481131 APOL1O14791 398 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 TCEA3O75764 348 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 CHEK2O96017 543 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 CKBP12277 381 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 GCSHP23434 173 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 MGAT1P26572 445 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 CTSWP56202 376 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 BTKQ06187 659 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 KRT72Q14CN4 511 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 SLC35G1Q2M3R5 365 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
UPF3A-207ENST00000481131 DCAF12L1Q5VU92 463 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 LMBRD2Q68DH5 695 aaPredicted RBP6.31□□□□□ -1.4
UPF3A-207ENST00000481131 NAIF1Q69YI7 327 aaPredicted RBP6.31□□□□□ -1.4
UPF3A-207ENST00000481131 Q6ZRM9 215 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 DNERQ8NFT8 737 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 BRI3BPQ8WY22 251 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 SNX22Q96L94 193 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 MYO1AQ9UBC5 1043 aa6.31□□□□□ -1.4
UPF3A-207ENST00000481131 CAPN14A8MX76 684 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 MT-ND5P03915 603 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 FGFR2P21802 821 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 TOB1P50616 345 aaPredicted RBP6.3□□□□□ -1.4
UPF3A-207ENST00000481131 SCNN1GP51170 649 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 NHLH2Q02577 135 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 RAB32Q13637 225 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 BOP1Q14137 746 aaKnown RBP6.3□□□□□ -1.4
UPF3A-207ENST00000481131 UBXN11Q5T124 520 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 AGAP9Q5VTM2 703 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 MAMDC4Q6UXC1 1216 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 SLC15A4Q8N697 577 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 ATP11CQ8NB49 1132 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 FAM46DQ8NEK8 389 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 Q8TCH9 128 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 NUP133Q8WUM0 1156 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 DDX17Q92841 729 aaKnown RBP6.3□□□□□ -1.4
UPF3A-207ENST00000481131 MARS2Q96GW9 593 aaKnown RBP6.3□□□□□ -1.4
UPF3A-207ENST00000481131 LRIG1Q96JA1 1093 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 RBM15Q96T37 977 aaKnown RBP eCLIP6.3□□□□□ -1.4
UPF3A-207ENST00000481131 SPATA5L1Q9BVQ7 753 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 PPCSQ9HAB8 311 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 ETAA1Q9NY74 926 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 HSFX1Q9UBD0 423 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 XPR1Q9UBH6 696 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 CDYLQ9Y232 598 aa6.3□□□□□ -1.4
UPF3A-207ENST00000481131 MBD3L4A6NDZ8 208 aaPredicted RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 MBD3L3A6NE82 208 aaPredicted RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 BUD31P41223 144 aaPredicted RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 HSPA7P48741 367 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 POU6F2P78424 691 aaPredicted RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 MPEG1Q2M385 716 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 FAM160B1Q5W0V3 765 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 GLB1LQ6UWU2 654 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 SGMS1Q86VZ5 419 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 RHOT2Q8IXI1 618 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 CFAP52Q8N1V2 620 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 MPP5Q8N3R9 675 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 NSUN7Q8NE18 718 aaKnown RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 MNTQ99583 582 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 SELENOOQ9BVL4 669 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 CHST8Q9H2A9 424 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 A1CFQ9NQ94 594 aaKnown RBP6.29□□□□□ -1.4
UPF3A-207ENST00000481131 HESX1Q9UBX0 185 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 JAG2Q9Y219 1238 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 TBC1D30Q9Y2I9 924 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 TMX2Q9Y320 296 aa6.29□□□□□ -1.4
UPF3A-207ENST00000481131 CUX2O14529 1486 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ABCC8Q09428 1581 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 A0A087WV62 115 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 GRXCR1A8MXD5 290 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 DCLK1O15075 740 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ZNF185O15231 689 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 VPS4BO75351 444 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ANXA2P07355 339 aaKnown RBP6.28□□□□□ -1.4
UPF3A-207ENST00000481131 ACO1P21399 889 aaKnown RBP6.28□□□□□ -1.4
UPF3A-207ENST00000481131 COMTP21964 271 aa6.28□□□□□ -1.4
UPF3A-207ENST00000481131 KLRC1P26715 233 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms