RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF334Q9HCZ1 680 aaPredicted RBP16.48■□□□□ 0.23
LIMS3-203ENST00000480744 DSEQ9UL01 958 aa16.48■□□□□ 0.23
LIMS3-203ENST00000480744 NCANO14594 1321 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 EP300Q09472 2414 aaPredicted RBP16.47■□□□□ 0.23
LIMS3-203ENST00000480744 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 HEPACAM2A8MVW5 462 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 MAN2B1O00754 1011 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 PPP1R37O75864 691 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 IL18RAPO95256 599 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 CYP11A1P05108 521 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 ADSSP30520 456 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
LIMS3-203ENST00000480744 CRELD2Q6UXH1 353 aaPredicted RBP16.47■□□□□ 0.23
LIMS3-203ENST00000480744 DNAJB7Q7Z6W7 309 aaPredicted RBP16.47■□□□□ 0.23
LIMS3-203ENST00000480744 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 MFSD6LQ8IWD5 586 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 THEM5Q8N1Q8 247 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 TRPV4Q9HBA0 871 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 PIAS3Q9Y6X2 628 aa16.47■□□□□ 0.23
LIMS3-203ENST00000480744 WDR87Q6ZQQ6 2873 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
LIMS3-203ENST00000480744 GABRR2P28476 465 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 CASP5P51878 434 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 TFAMQ00059 246 aaKnown RBP16.46■□□□□ 0.23
LIMS3-203ENST00000480744 VEPH1Q14D04 833 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 SLC39A14Q15043 492 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 SV2CQ496J9 727 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 ARHGAP15Q53QZ3 475 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 PDILTQ8N807 584 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 CSGALNACT1Q8TDX6 532 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 FAM3CQ92520 227 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 PSMG2Q969U7 264 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 CLDN23Q96B33 292 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 RSPRY1Q96DX4 576 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 INTS4Q96HW7 963 aaKnown RBP16.46■□□□□ 0.23
LIMS3-203ENST00000480744 ZNF560Q96MR9 790 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 LPIN3Q9BQK8 851 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 STRA6Q9BX79 667 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 ZCWPW1Q9H0M4 648 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 PANK4Q9NVE7 773 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 PCDHB13Q9Y5F0 798 aa16.46■□□□□ 0.23
LIMS3-203ENST00000480744 OBSL1O75147 1896 aa16.46■□□□□ 0.22
LIMS3-203ENST00000480744 A0A087X0B3 334 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GOLGA8IPA6NC78 632 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 SHISA7A6NL88 538 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GOLGA8JA6NMD2 632 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 KPNA7A9QM74 516 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 DPYSL4O14531 572 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 STX6O43752 255 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 FGF19O95750 216 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 TUFMP49411 452 aaKnown RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 WNT7BP56706 349 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 POU5F1Q01860 360 aaKnown RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 STK38Q15208 465 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 TAF12Q16514 161 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ZNF528Q3MIS6 628 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GPR158Q5T848 1215 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ARID3BQ8IVW6 561 aaPredicted RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 E2F7Q96AV8 911 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 GCNAQ96QF7 691 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 OLFML3Q9NRN5 406 aa16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ABI2Q9NYB9 513 aaPredicted RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 RBAKQ9NYW8 714 aaPredicted RBP16.45■□□□□ 0.22
LIMS3-203ENST00000480744 ZNF292O60281 2723 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
LIMS3-203ENST00000480744 ATF6P18850 670 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 CCNE1P24864 410 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 POLR2BP30876 1174 aaKnown RBP16.44■□□□□ 0.22
LIMS3-203ENST00000480744 CYP4F8P98187 520 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 MTAPQ13126 283 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 BRSK2Q8IWQ3 736 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 KIAA2013Q8IYS2 634 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 PCIF1Q9H4Z3 704 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 TRPV5Q9NQA5 729 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 HSFX1Q9UBD0 423 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
LIMS3-203ENST00000480744 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 ITGB3P05106 788 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 GARTP22102 1010 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 PNPLA4P41247 253 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 ID4P47928 161 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms