RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SMOC2Q9H3U7 446 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 UXTQ9UBK9 157 aaPredicted RBP12.34□□□□□ -0.43
CCM2-213ENST00000480658 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
CCM2-213ENST00000480658 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 SEC24AO95486 1093 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 ITGB3P05106 788 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 NPR3P17342 541 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 CEBPBP17676 345 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 AP3M2P53677 418 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 NTHL1P78549 312 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 DUSP4Q13115 394 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 PSMD2Q13200 908 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 SLC5A9Q2M3M2 681 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 RESP18Q5W5W9 173 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 ING5Q8WYH8 240 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 MCRS1Q96EZ8 462 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 ASB16Q96NS5 453 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 ACBD6Q9BR61 282 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
CCM2-213ENST00000480658 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
CCM2-213ENST00000480658 GDAP2Q9NXN4 497 aa12.33□□□□□ -0.44
CCM2-213ENST00000480658 TSC2P49815 1807 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 A0A087X0B3 334 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 KRBA1A5PL33 1030 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 POLR2DO15514 142 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 MYL4P12829 197 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 IGFBP6P24592 240 aaPredicted RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 RPS9P46781 194 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 PDE6CP51160 858 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 CASP5P51878 434 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 RPL10AP62906 217 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 GPC5P78333 572 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 MGAT5BQ3V5L5 792 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 SHC4Q6S5L8 630 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 XXYLT1Q8NBI6 393 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 FEZF2Q8TBJ5 459 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 TMEM174Q8WUU8 243 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCM2-213ENST00000480658 PGLYRP2Q96PD5 576 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 KXD1Q9BQD3 176 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 CBWD1Q9BRT8 395 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 BRD9Q9H8M2 597 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 CEP72Q9P209 647 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
CCM2-213ENST00000480658 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
CCM2-213ENST00000480658 TISP43B9A030 160 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 H0Y858 1186 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 DPYSL4O14531 572 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 ZNF263O14978 683 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 PRPF6O94906 941 aaKnown RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 KRT19P08727 400 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 CSH1P0DML2 217 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 CSH2P0DML3 217 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 GUCY2FP51841 1108 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 KCNA1Q09470 495 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 SNRNP35Q16560 246 aaKnown RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 FAM78AQ5JUQ0 283 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 MFSD6LQ8IWD5 586 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 CSGALNACT2Q8N6G5 542 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 NOC3LQ8WTT2 800 aaKnown RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 THG1LQ9NWX6 298 aaKnown RBP12.31□□□□□ -0.44
CCM2-213ENST00000480658 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 AGAP1Q9UPQ3 857 aa12.31□□□□□ -0.44
CCM2-213ENST00000480658 DOCK8Q8NF50 2099 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 SPTLC1O15269 473 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 GFRA3O60609 400 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 AMPD2Q01433 879 aa12.3□□□□□ -0.44
CCM2-213ENST00000480658 SNW1Q13573 536 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms