RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 WEE1P30291 646 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 RHDQ02161 417 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
USP11-208ENST00000480104 SMAD1Q15797 465 aaKnown RBP13.1□□□□□ -0.31
USP11-208ENST00000480104 UPP1Q16831 310 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 PLEKHG6Q3KR16 790 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 RIN3Q8TB24 985 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 BAP1Q92560 729 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 FZD8Q9H461 694 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP11-208ENST00000480104 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 CCL26Q9Y258 94 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
USP11-208ENST00000480104 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
USP11-208ENST00000480104 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 VNN2O95498 520 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 CPB1P15086 417 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 EPHB3P54753 998 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 PSMC5P62195 406 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 GRIK2Q13002 908 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 CAPSQ13938 189 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 TLN1Q9Y490 2541 aaKnown RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
USP11-208ENST00000480104 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
USP11-208ENST00000480104 ENO4A6NNW6 628 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
USP11-208ENST00000480104 SYN3O14994 580 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 PLD1Q13393 1074 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 TFDP1Q14186 410 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
USP11-208ENST00000480104 CCDC157Q569K6 752 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 ZNF280DQ6N043 979 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 MICU3Q86XE3 530 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
USP11-208ENST00000480104 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 UROC1Q96N76 676 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 WRAP73Q9P2S5 460 aaPredicted RBP13.08□□□□□ -0.32
USP11-208ENST00000480104 PPME1Q9Y570 386 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 LRBAP50851 2863 aa13.08□□□□□ -0.32
USP11-208ENST00000480104 CENPEQ02224 2701 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 CABIN1Q9Y6J0 2220 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 K7EQS6 105 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 EDIL3O43854 480 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 FGF19O95750 216 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 ADSSP30520 456 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 CCR10P46092 362 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 CCDC173Q0VFZ6 552 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 BYSLQ13895 437 aaKnown RBP13.07□□□□□ -0.32
USP11-208ENST00000480104 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
USP11-208ENST00000480104 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 DNAJB7Q7Z6W7 309 aaPredicted RBP13.07□□□□□ -0.32
USP11-208ENST00000480104 SPACA3Q8IXA5 215 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
USP11-208ENST00000480104 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 PSMG2Q969U7 264 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 HSPA12BQ96MM6 686 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 PGLYRP2Q96PD5 576 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 CDC6Q99741 560 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
USP11-208ENST00000480104 BSNQ9UPA5 3926 aa13.07□□□□□ -0.32
USP11-208ENST00000480104 SPTBN1Q01082 2364 aaKnown RBP13.06□□□□□ -0.32
USP11-208ENST00000480104 PLXND1Q9Y4D7 1925 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 PRC1O43663 620 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 ALDH1A3P47895 512 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 SOX4Q06945 474 aaPredicted RBP13.06□□□□□ -0.32
USP11-208ENST00000480104 FUT2Q10981 343 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 DUSP4Q13115 394 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 PKDCCQ504Y2 493 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
USP11-208ENST00000480104 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 SLC41A1Q8IVJ1 513 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms