RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 LIMS2Q7Z4I7 341 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 TTC39CQ8N584 583 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 OR6B3Q8NGW1 331 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 SPATA18Q8TC71 538 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 MRPL45Q9BRJ2 306 aaKnown RBP11.97□□□□□ -0.49
CLDN11-205ENST00000480067 BCO2Q9BYV7 579 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 ZBP1Q9H171 429 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 EPOPA6NHQ4 379 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 PDGFRBP09619 1106 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 UCHL3P15374 230 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 WARSP23381 471 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 RAP1GAPP47736 663 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 SMC1AQ14683 1233 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 MRPL43Q8N983 215 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 GDPD5Q8WTR4 605 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 AUTS2Q8WXX7 1259 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 JAKMIP2Q96AA8 810 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 ARID3AQ99856 593 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 OXCT2Q9BYC2 517 aaPredicted RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 LMAN2LQ9H0V9 348 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 SDCBP2Q9H190 292 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 FAM124BQ9H5Z6 455 aaPredicted RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 SIX2Q9NPC8 291 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 CISHQ9NSE2 258 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
CLDN11-205ENST00000480067 DNAJC12Q9UKB3 198 aa11.96□□□□□ -0.49
CLDN11-205ENST00000480067 SCN1AP35498 2009 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.96□□□□□ -0.5
CLDN11-205ENST00000480067 A8MXQ7 604 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 GABRDO14764 452 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 AP5Z1O43299 807 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 RFX1P22670 979 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 PCSK1P29120 753 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 POLR2FP61218 127 aaKnown RBP11.96□□□□□ -0.5
CLDN11-205ENST00000480067 CREMQ03060 361 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 RAPGEF1Q13905 1077 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 CAMK1Q14012 370 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 MRPL58Q14197 206 aaKnown RBP11.96□□□□□ -0.5
CLDN11-205ENST00000480067 GRIN2CQ14957 1233 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 PSMD5Q16401 504 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 ARHGAP44Q17R89 818 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF280DQ6N043 979 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 DPY19L2P1Q6NXN4 242 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 KAT5Q92993 513 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 FAM161BQ96MY7 647 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 ACBD6Q9BR61 282 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 NUP58Q9BVL2 599 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 PRDM12Q9H4Q4 367 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.5
CLDN11-205ENST00000480067 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.5
CLDN11-205ENST00000480067 STXBP5LQ9Y2K9 1186 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 BACE2Q9Y5Z0 518 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 GBF1Q92538 1859 aa11.96□□□□□ -0.5
CLDN11-205ENST00000480067 OR6C75A6NL08 312 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 LILRB3O75022 631 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 NOL4O94818 638 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 KRT5P13647 590 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 LMO2P25791 158 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 NDST1P52848 882 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 TSPY1Q01534 308 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 INCA1Q0VD86 236 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 GSE1Q14687 1217 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 PTPN14Q15678 1187 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 CACNA2D4Q7Z3S7 1137 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 UNC93AQ86WB7 457 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 MRPL38Q96DV4 380 aaKnown RBP11.95□□□□□ -0.5
CLDN11-205ENST00000480067 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 NT5C1AQ9BXI3 368 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 MTRRQ9UBK8 725 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 FBXL5Q9UKA1 691 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 DAAM1Q9Y4D1 1078 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 FHOD1Q9Y613 1164 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
CLDN11-205ENST00000480067 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 C2orf71A6NGG8 1288 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 HIDE1A8MVS5 230 aa11.94□□□□□ -0.5
CLDN11-205ENST00000480067 FSCN2O14926 492 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms