RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 CETPP11597 493 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 SLC9A1P19634 815 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 AMPD1P23109 780 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 COILP38432 576 aaPredicted RBP11.46□□□□□ -0.58
CHD6-208ENST00000480022 TECP42680 631 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.58
CHD6-208ENST00000480022 OLFML1Q6UWY5 402 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 CCDC65Q8IXS2 484 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 ACER1Q8TDN7 264 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 LARP4BQ92615 738 aaKnown RBP11.46□□□□□ -0.58
CHD6-208ENST00000480022 SLC10A4Q96EP9 437 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 ZNF862O60290 1169 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 TROVE2P10155 538 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD6-208ENST00000480022 PYGMP11217 842 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 PORP16435 677 aaPredicted RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 ECE1P42892 770 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 VPS41P49754 854 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 SERPINB8P50452 374 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 MTTPP55157 894 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 AP2B1P63010 937 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 GRAMD4Q6IC98 578 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 OTOAQ7RTW8 1153 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 CCDC77Q9BR77 488 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 NPHS2Q9NP85 383 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 DDX18Q9NVP1 670 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 TAS2R1Q9NYW7 299 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 TMED5Q9Y3A6 229 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 BOLA2-SMG1P6H3BVE0 249 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 IPO5O00410 1097 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 VILLO15195 856 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 SPAG7O75391 227 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 SMARCA1P28370 1054 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 GTF2H1P32780 548 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 PGM1P36871 562 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 CETN2P41208 172 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 APLP1P51693 650 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 RAP1GDS1P52306 607 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 RBM44Q6ZP01 1051 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 TRIM67Q6ZTA4 783 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 PIP4K2CQ8TBX8 421 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 DENND1AQ8TEH3 1009 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 WDR18Q9BV38 432 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 FAIMQ9NVQ4 179 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 WHRNQ9P202 907 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 GREB1LQ9C091 1923 aaPredicted RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 BAG2O95816 211 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 CHKAP35790 457 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 GJA5P36382 358 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 ASPHQ12797 758 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 SPP2Q13103 211 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 GRB10Q13322 594 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 TMED2Q15363 201 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 TMEM63BQ5T3F8 832 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 C1orf228Q6PIY5 440 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 RFX8Q6ZV50 586 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 RASSF3Q86WH2 238 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ZDHHC14Q8IZN3 488 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 LRRC47Q8N1G4 583 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 UBL4BQ8N7F7 174 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 CEP70Q8NHQ1 597 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 AS3MTQ9HBK9 375 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ZDHHC7Q9NXF8 308 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ZNF180Q9UJW8 692 aa11.45□□□□□ -0.58
CHD6-208ENST00000480022 ABT1Q9ULW3 272 aaKnown RBP11.45□□□□□ -0.58
CHD6-208ENST00000480022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD6-208ENST00000480022 ZMYM2Q9UBW7 1377 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 ESRRAP11474 423 aaPredicted RBP11.44□□□□□ -0.58
CHD6-208ENST00000480022 ABCB4P21439 1286 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 NR1H3Q13133 447 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 CYP1B1Q16678 543 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 SEL1L2Q5TEA6 688 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 C6orf163Q5TEZ5 329 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 CCDC62Q6P9F0 684 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 LRRC8BQ6P9F7 803 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 ZBED8Q8IZ13 594 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 ATP11CQ8NB49 1132 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 OR6Y1Q8NGX8 325 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 DDX12PQ92771 950 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 KCNN1Q92952 543 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 TTC1Q99614 292 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 LRRC27Q9C0I9 530 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 NINJ2Q9NZG7 142 aa11.44□□□□□ -0.58
CHD6-208ENST00000480022 MTUS1Q9ULD2 1270 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms