RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ZBED6P86452 979 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 DRAP1Q14919 205 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 WSCD1Q658N2 575 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 CACNA2D4Q7Z3S7 1137 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 FAM71AQ8IYT1 594 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 C11orf84Q9BUA3 381 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 OXCT2Q9BYC2 517 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.262e-14■■■■■ 240.4
TRAPPC12-218ENST00000479897 I3L4J1 428 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 MFAP3LO75121 409 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 TPM1P09493 284 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 WEE2P0C1S8 567 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 CASP14P31944 242 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 RAP1GAPP47736 663 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 DSG1Q02413 1049 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 KRT17Q04695 432 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 RAPGEF1Q13905 1077 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 FAM171A1Q5VUB5 890 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 PPFIBP1Q86W92 1011 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 KLHL23Q8NBE8 558 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 WHAMMQ8TF30 809 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 PIK3R5Q8WYR1 880 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 SYN2Q92777 582 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 DNAJC7Q99615 494 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 NKX2-4Q9H2Z4 354 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
TRAPPC12-218ENST00000479897 LAMA3Q16787 3333 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 TMEM265A0A087WTH1 108 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 PAEPP09466 180 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 PCSK1P29120 753 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 SOX5P35711 763 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 STAT1P42224 750 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 GLUD2P49448 558 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 CDH8P55286 799 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 YWHAHQ04917 246 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 NT5C1AQ9BXI3 368 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 NME7Q9Y5B8 376 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 IRAK3Q9Y616 596 aa13.39□□□□□ -0.27
TRAPPC12-218ENST00000479897 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 H3BNC9 293 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 H7C4K7 107 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 FOXN3O00409 490 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 URODP06132 367 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 CTSAP10619 480 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 CD58P19256 250 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 KRT9P35527 623 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 PRKCIP41743 596 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 NDST1P52848 882 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 CREMQ03060 361 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 KIAA0319Q5VV43 1072 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 CRYBG2Q8N1P7 616 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 RBBP8NLQ8NC74 664 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TNIP3Q96KP6 325 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 SNX25Q9H3E2 840 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 SLC28A3Q9HAS3 691 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 DDX43Q9NXZ2 648 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 AIPL1Q9NZN9 384 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms