RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 BCO2Q9BYV7 579 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 OSBPL6Q9BZF3 934 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 GPR88Q9GZN0 384 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 TNMDQ9H2S6 317 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 TMEM206Q9H813 350 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 LTB4R2Q9NPC1 389 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 HEBP1Q9NRV9 189 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 RBAKQ9NYW8 714 aaPredicted RBP15.47■□□□□ 0.07
ATG4B-218ENST00000479554 TFIP11Q9UBB9 837 aaKnown RBP15.47■□□□□ 0.07
ATG4B-218ENST00000479554 HSFX1Q9UBD0 423 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 ASB3Q9Y575 518 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 TCHHQ07283 1943 aa15.47■□□□□ 0.07
ATG4B-218ENST00000479554 SCN1AP35498 2009 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 FAM170BA6NMN3 283 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 KPNA7A9QM74 516 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 SOAT2O75908 522 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 YEATS4O95619 227 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 PTMSP20962 102 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 CD72P21854 359 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 PNPLA4P41247 253 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 WNT7BP56706 349 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 VEPH1Q14D04 833 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 VITQ6UXI7 678 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 STXBP4Q6ZWJ1 553 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 ITIH5Q86UX2 942 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 DEPDC1BQ8WUY9 529 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 IRF7Q92985 503 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 PSMG2Q969U7 264 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 SEPT5Q99719 369 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-218ENST00000479554 CBWD1Q9BRT8 395 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 LRRC3Q9BY71 257 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 ZCWPW1Q9H0M4 648 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 CUEDC2Q9H467 287 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 TRPV4Q9HBA0 871 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 MRPS17Q9Y2R5 130 aaKnown RBP15.46■□□□□ 0.07
ATG4B-218ENST00000479554 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
ATG4B-218ENST00000479554 MTF2Q9Y483 593 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-218ENST00000479554 GOLGA8IPA6NC78 632 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 GOLGA8JA6NMD2 632 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 EXTL3O43909 919 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 CUTAO60888 179 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 PRPF6O94906 941 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 FGF19O95750 216 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 ITGB3P05106 788 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 PSMC3P17980 439 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 TARSP26639 723 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 POLR2BP30876 1174 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 GDI1P31150 447 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 VIPR2P41587 438 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 MAGEA9P43362 315 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 TUFMP49411 452 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 PKP1Q13835 747 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 MGAT5BQ3V5L5 792 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 WSCD1Q658N2 575 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 ZC3H14Q6PJT7 736 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF852Q6ZMS4 543 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 C2orf15Q8WU43 125 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 CACTINQ8WUQ7 758 aaKnown RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 DHX58Q96C10 678 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 BORCS6Q96GS4 357 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 PCIF1Q9H4Z3 704 aa15.45■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF334Q9HCZ1 680 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 SPATA6Q9NWH7 488 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-218ENST00000479554 COL4A2P08572 1712 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 HEPACAM2A8MVW5 462 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 NCAM2O15394 837 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 SP9P0CG40 484 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 CDR1P51861 262 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 ASIC1P78348 528 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 AMPD3Q01432 767 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 SMARCB1Q12824 385 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 E2F4Q16254 413 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 DNAJB7Q7Z6W7 309 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-218ENST00000479554 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 DCP1BQ8IZD4 617 aaKnown RBP15.44■□□□□ 0.06
ATG4B-218ENST00000479554 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 E2F7Q96AV8 911 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 GCNAQ96QF7 691 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 NELL2Q99435 816 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 LPIN3Q9BQK8 851 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 ATXN3LQ9H3M9 355 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 KBTBD4Q9NVX7 518 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 ABI2Q9NYB9 513 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-218ENST00000479554 ITGA11Q9UKX5 1188 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 AGAP1Q9UPQ3 857 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 R4GN57 208 aa15.44■□□□□ 0.06
ATG4B-218ENST00000479554 NCANO14594 1321 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 PATJQ8NI35 1801 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 GOLGA6L22H0YM25 854 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 MAN2B1O00754 1011 aa15.43■□□□□ 0.06
ATG4B-218ENST00000479554 ZNF263O14978 683 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms