RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 XPR1Q9UBH6 696 aa11.46□□□□□ -0.58
EWSR1-216ENST00000479135 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.58
EWSR1-216ENST00000479135 GRIN2AQ12879 1464 aa11.46□□□□□ -0.58
EWSR1-216ENST00000479135 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 SPTLC1O15269 473 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 RAD51BO15315 384 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GALK1P51570 392 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 SRSF11Q05519 484 aaKnown RBP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CCDC153Q494R4 210 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 WLSQ5T9L3 541 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZNF544Q6NX49 715 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 TNIP2Q8NFZ5 429 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 NHEJ1Q9H9Q4 299 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CMTM6Q9NX76 183 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PFKFB1P16118 471 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CYP27A1Q02318 531 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CYP51A1Q16850 503 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZCWPW2Q504Y3 356 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PJA1Q8NG27 643 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 EXOC2Q96KP1 924 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FAM200BP0CF97 657 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FBLN1P23142 703 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 RRM2P31350 389 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 POLD3Q15054 466 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GPRASP2Q96D09 838 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FAM129AQ9BZQ8 928 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 UCKL1Q9NWZ5 548 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GDAQ9Y2T3 454 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZAP70P43403 619 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GRB14Q14449 540 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CRTC1Q6UUV9 634 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 RPTNQ6XPR3 784 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 EXO5Q9H790 373 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 A0A0X1KG70 313 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PTGES3LE9PB15 166 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 NCK2O43639 380 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GPC1P35052 558 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 HNMTP50135 292 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 SLFNL1Q499Z3 407 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 DAW1Q8N136 415 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 CLCC1Q96S66 551 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 GOLPH3LQ9H4A5 285 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PTPRCP08575 1304 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 FAM47E-STBD1D6RA91 191 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 PPP2R1BP30154 601 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 STK4Q13043 487 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 EML3Q32P44 896 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.45□□□□□ -0.58
EWSR1-216ENST00000479135 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 YAF2Q8IY57 180 aa11.45□□□□□ -0.58
EWSR1-216ENST00000479135 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 MED7O43513 233 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 ZNF37AP17032 561 aaPredicted RBP11.44□□□□□ -0.58
EWSR1-216ENST00000479135 UBA1P22314 1058 aaKnown RBP11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PLA2G4AP47712 749 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 RAB2AP61019 212 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 DSN1Q9H410 356 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PADI4Q9UM07 663 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PSMD9O00233 223 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 SLC27A2O14975 620 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 OR6A2O95222 327 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 LCP1P13796 627 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 AP2S1P53680 142 aaPredicted RBP11.44□□□□□ -0.58
EWSR1-216ENST00000479135 RELTQ969Z4 430 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
EWSR1-216ENST00000479135 LYVE1Q9Y5Y7 322 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 SASH1O94885 1247 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PCNAP12004 261 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 FNTAP49354 379 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PSME3P61289 254 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 ZNF235Q14590 738 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 DNAL1Q4LDG9 190 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 DNAJB7Q7Z6W7 309 aaPredicted RBP11.44□□□□□ -0.58
EWSR1-216ENST00000479135 DGCR6LQ9BY27 220 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PHACTR1Q9C0D0 580 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 PCMTD2Q9NV79 361 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 CDYLQ9Y232 598 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 ARL5AQ9Y689 179 aa11.44□□□□□ -0.58
EWSR1-216ENST00000479135 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms