RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SNX27Q96L92 541 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 RNPC3Q96LT9 517 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 ZNF560Q96MR9 790 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PNKPQ96T60 521 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 ARID3AQ99856 593 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 NCAPGQ9BPX3 1015 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 SEZ6LQ9BYH1 1024 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 FAM49AQ9H0Q0 323 aaPredicted RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 RAB17Q9H0T7 212 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 RBM12Q9NTZ6 932 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 DPP3Q9NY33 737 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 FEZ2Q9UHY8 353 aaPredicted RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 SIX4Q9UIU6 781 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 COG5Q9UP83 839 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 PODXLO00592 558 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CILPO75339 1184 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 TOMM70O94826 608 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 NPTXRO95502 500 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 TBC1D8O95759 1140 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 ITGB3P05106 788 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 WEE2P0C1S8 567 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 C6orf222P0C671 652 aaPredicted RBP8.43□□□□□ -1.06
VMA21-203ENST00000477649 SETSIPP0DME0 302 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CHRNA3P32297 505 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 FLT3LGP49771 235 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 PEX5P50542 639 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 PRMT2P55345 433 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 OSTNP61366 133 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 SP3Q02447 781 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 PIGHQ14442 188 aaPredicted RBP8.43□□□□□ -1.06
VMA21-203ENST00000477649 ZBTB6Q15916 424 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CNGA2Q16280 664 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CCL14Q16627 93 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 ALKAL1Q6UXT8 129 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 SYDE1Q6ZW31 735 aaPredicted RBP8.43□□□□□ -1.06
VMA21-203ENST00000477649 DPH6Q7L8W6 267 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 ERICH1Q86X53 443 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 RHOT1Q8IXI2 618 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 DNAJC5GQ8N7S2 189 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 GOLGA6L1Q8N7Z2 621 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CEP120Q8N960 986 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 C3orf20Q8ND61 904 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CXorf38Q8TB03 319 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 FEZF2Q8TBJ5 459 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 WHAMMQ8TF30 809 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 FNIP1Q8TF40 1166 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 DNAJB3Q8WWF6 145 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CAVIN3Q969G5 261 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CYFIP2Q96F07 1278 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CPB2Q96IY4 423 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 PSMB7Q99436 277 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 LRRC1Q9BTT6 524 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 FUT8Q9BYC5 575 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 CELF4Q9BZC1 486 aaKnown RBP8.43□□□□□ -1.06
VMA21-203ENST00000477649 MED4Q9NPJ6 270 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 GDF3Q9NR23 364 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 ZNF446Q9NWS9 450 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 GTF2IRD1Q9UHL9 959 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 RASAL2Q9UJF2 1139 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 ANAPC7Q9UJX3 599 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 BARX2Q9UMQ3 279 aaPredicted RBP8.43□□□□□ -1.06
VMA21-203ENST00000477649 AGAP1Q9UPQ3 857 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 TRPV2Q9Y5S1 764 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 SQORQ9Y6N5 450 aa8.43□□□□□ -1.06
VMA21-203ENST00000477649 LCE2BO14633 110 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 NDC80O14777 642 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 GPR182O15218 404 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
VMA21-203ENST00000477649 FGGP02679 453 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 SKIP12755 728 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 DESP17661 470 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 RRM1P23921 792 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 FNTAP49354 379 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 RAB27AP51159 221 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 DRG2P55039 364 aaKnown RBP8.42□□□□□ -1.06
VMA21-203ENST00000477649 COPS2P61201 443 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 MRPS6P82932 125 aaKnown RBP8.42□□□□□ -1.06
VMA21-203ENST00000477649 MAMLD1Q13495 774 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 ZNF268Q14587 947 aaPredicted RBP8.42□□□□□ -1.06
VMA21-203ENST00000477649 CASP8Q14790 479 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 CYP1B1Q16678 543 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 SGO2Q562F6 1265 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 HSP90B2PQ58FF3 399 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 DMRTA1Q5VZB9 504 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 DNAJC24Q6P3W2 148 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
VMA21-203ENST00000477649 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 CPA5Q8WXQ8 436 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 MS4A14Q96JA4 679 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 KRT12Q99456 494 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 OSMRQ99650 979 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 TRAIPQ9BWF2 469 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 NT5C1AQ9BXI3 368 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 ACP6Q9NPH0 428 aa8.42□□□□□ -1.06
VMA21-203ENST00000477649 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms