RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 TOPORSQ9NS56 1045 aaPredicted RBP8.06□□□□□ -1.12
PRPF3-205ENST00000476970 WRAP73Q9P2S5 460 aaPredicted RBP8.06□□□□□ -1.12
PRPF3-205ENST00000476970 VAV3Q9UKW4 847 aa8.06□□□□□ -1.12
PRPF3-205ENST00000476970 BRPF3Q9ULD4 1205 aa8.06□□□□□ -1.12
PRPF3-205ENST00000476970 INVSQ9Y283 1065 aa8.06□□□□□ -1.12
PRPF3-205ENST00000476970 GDAQ9Y2T3 454 aa8.06□□□□□ -1.12
PRPF3-205ENST00000476970 OBSL1O75147 1896 aa8.06□□□□□ -1.12
PRPF3-205ENST00000476970 A0A087WV48 116 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 J3QKU1 62 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 EDIL3O43854 480 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 C1QL1O75973 258 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 GSPT1P15170 499 aaKnown RBP8.05□□□□□ -1.12
PRPF3-205ENST00000476970 BCKDHBP21953 392 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 GABRR2P28476 465 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 MCM4P33991 863 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 NLRP5P59047 1200 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 FAM193AP78312 1265 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 DUOXA1Q1HG43 343 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 PEAR1Q5VY43 1037 aaPredicted RBP8.05□□□□□ -1.12
PRPF3-205ENST00000476970 CREB3L3Q68CJ9 461 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 CDCA2Q69YH5 1023 aaPredicted RBP8.05□□□□□ -1.12
PRPF3-205ENST00000476970 ANO7Q6IWH7 933 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 CD300LGQ6UXG3 332 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 NOSTRINQ8IVI9 506 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 CPA6Q8N4T0 437 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 BEST2Q8NFU1 509 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 PSMG2Q969U7 264 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 TBC1D32Q96NH3 1257 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 LRRC3BQ96PB8 259 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 RNF26Q9BY78 433 aaPredicted RBP8.05□□□□□ -1.12
PRPF3-205ENST00000476970 FZD8Q9H461 694 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 EBF3Q9H4W6 596 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 HPS4Q9NQG7 708 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 GKN1Q9NS71 199 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 POLR3BQ9NW08 1133 aaPredicted RBP8.05□□□□□ -1.12
PRPF3-205ENST00000476970 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 KNTC1P50748 2209 aa8.05□□□□□ -1.12
PRPF3-205ENST00000476970 TSC2P49815 1807 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 SYPP08247 313 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 SERPINF2P08697 491 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 GCFC2P16383 781 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 MARCKSP29966 332 aaPredicted RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 RPL9P32969 192 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 AVPR1AP37288 418 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 BFSP1Q12934 665 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 CTTNQ14247 550 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 VEPH1Q14D04 833 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 PDGFRLQ15198 375 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 LARP1BQ659C4 914 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 NCAPH2Q6IBW4 605 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 GAREM2Q75VX8 874 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 DHX32Q7L7V1 743 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 TPH2Q8IWU9 490 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 MINDY1Q8N5J2 469 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 MCPH1Q8NEM0 835 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 MDGA1Q8NFP4 955 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 WHAMMQ8TF30 809 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 CD101Q93033 1021 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 DYDC2Q96IM9 177 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 SUSD3Q96L08 255 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 KIF2CQ99661 725 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 NAP1L4Q99733 375 aaKnown RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 CXCL16Q9H2A7 254 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 OCEL1Q9H607 264 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 KCNMB3Q9NPA1 279 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 ANKEF1Q9NU02 776 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 VPS54Q9P1Q0 977 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 MBD1Q9UIS9 605 aaPredicted RBP8.04□□□□□ -1.12
PRPF3-205ENST00000476970 PCDHA4Q9UN74 947 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 STK24Q9Y6E0 443 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 NID2Q14112 1375 aa8.04□□□□□ -1.12
PRPF3-205ENST00000476970 ATXN2Q99700 1313 aaKnown RBP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 MYO18AQ92614 2054 aaKnown RBP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 SMIM28A0A1B0GU29 152 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 OR6C75A6NL08 312 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 CYSRT1A8MQ03 144 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 ACKR2O00590 384 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 ARHGAP6O43182 974 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 AP5Z1O43299 807 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 SLC37A4O43826 429 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 USO1O60763 962 aaKnown RBP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 LYPLA2O95372 231 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 IGFBP6P24592 240 aaPredicted RBP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 DDX6P26196 483 aaKnown RBP eCLIP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 GJA4P35212 333 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 P2RY2P41231 377 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 GALK1P51570 392 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 CYP4F8P98187 520 aa8.03□□□□□ -1.12
PRPF3-205ENST00000476970 YWHAHQ04917 246 aaPredicted RBP8.03□□□□□ -1.12
PRPF3-205ENST00000476970 TAF12Q16514 161 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms