RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 SPATA18Q8TC71 538 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 WHAMMQ8TF30 809 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 NKX2-4Q9H2Z4 354 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 MYO6Q9UM54 1294 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 CNTN6Q9UQ52 1028 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.16
PRUNE1-210ENST00000475722 LRRC53A6NM62 1247 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 C5orf67F2Z3F1 127 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 GABRDO14764 452 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 MFAP3LO75121 409 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 CILPO75339 1184 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 SOD2P04179 222 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 RB1P06400 928 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 PNMA6AP0CW24 399 aaPredicted RBP16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 KRT5P13647 590 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 KRT9P35527 623 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 SOX5P35711 763 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 GNL1P36915 607 aaPredicted RBP16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 STAT1P42224 750 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 LHX1P48742 406 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 ADKP55263 362 aaKnown RBP16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 ERVK-21P61565 698 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 SMAD3P84022 425 aaKnown RBP16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 KRT17Q04695 432 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 GOLGA8FQ08AF8 430 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 GOLGA8DPQ0D2H9 430 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 OVOS1Q6IE37 1185 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 TMEM270Q6UE05 265 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 FAM71AQ8IYT1 594 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 OR6B3Q8NGW1 331 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 B3GALT6Q96L58 329 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 SAMD11Q96NU1 681 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 CHST7Q9NS84 486 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 NME7Q9Y5B8 376 aa16.01■□□□□ 0.15
PRUNE1-210ENST00000475722 A0A1W2PPC1 479 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 AKR1B15C9JRZ8 316 aaPredicted RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 OAZ2O95190 189 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 LMO2P25791 158 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 USP8P40818 1118 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 NDST1P52848 882 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 MRPL58Q14197 206 aaKnown RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 USP41Q3LFD5 358 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 RTP2Q5QGT7 225 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 UNC93AQ86WB7 457 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 CEP57Q86XR8 500 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 CNGA4Q8IV77 575 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 TC2NQ8N9U0 490 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 RBBP8NLQ8NC74 664 aaPredicted RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 TWNKQ96RR1 684 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 RTP3Q9BQQ7 232 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 TTPALQ9BTX7 342 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 HERC2P3Q9BVR0 1158 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 NUCKS1Q9H1E3 243 aaKnown RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
PRUNE1-210ENST00000475722 STK39Q9UEW8 545 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 HMGXB4Q9UGU5 601 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 MTUS1Q9ULD2 1270 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 STXBP5LQ9Y2K9 1186 aa16■□□□□ 0.15
PRUNE1-210ENST00000475722 A8MXQ7 604 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 CYP26A1O43174 497 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 HCRTO43612 131 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 GFPT2O94808 682 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 PDGFRBP09619 1106 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 DNAJB2P25686 324 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 CLCN1P35523 988 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 ZNF132P52740 706 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 RAD23BP54727 409 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 ARID5BQ14865 1188 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 ZNF394Q53GI3 561 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 SFMBT2Q5VUG0 894 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 E4F1Q66K89 784 aaPredicted RBP15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 PPP2R2DQ66LE6 453 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 VPS52Q8N1B4 723 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 OR8K1Q8NGG5 319 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 SPPL3Q8TCT6 385 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 SYN2Q92777 582 aaPredicted RBP15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 DNAJC7Q99615 494 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 NT5C1AQ9BXI3 368 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 SLC28A3Q9HAS3 691 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 AIPL1Q9NZN9 384 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 LZTS1Q9Y250 596 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 NLRC5Q86WI3 1866 aa15.99■□□□□ 0.15
PRUNE1-210ENST00000475722 TSC2P49815 1807 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 CHD9Q3L8U1 2897 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 GLUD2P49448 558 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 DSG1Q02413 1049 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 ARID5AQ03989 594 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 ORC1Q13415 861 aa15.98■□□□□ 0.15
PRUNE1-210ENST00000475722 ASIC2Q16515 512 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms