RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TAF2Q6P1X5 1199 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 GRASPQ7Z6J2 395 aaPredicted RBP5.95□□□□□ -1.46
LTN1-204ENST00000475344 PCSK9Q8NBP7 692 aaKnown RBP5.95□□□□□ -1.46
LTN1-204ENST00000475344 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 UROC1Q96N76 676 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 CNPPD1Q9BV87 410 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 AASDHPPTQ9NRN7 309 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 LMBRD1Q9NUN5 540 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 RLIMQ9NVW2 624 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 AGAP1Q9UPQ3 857 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
LTN1-204ENST00000475344 CCDC151A5D8V7 595 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 E7ENX8 843 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 M0QYG6 137 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 TRIAP1O43715 76 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 AHSGP02765 367 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 RHOP08100 348 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 RARBP10826 455 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 LPOP22079 712 aaPredicted RBP5.94□□□□□ -1.46
LTN1-204ENST00000475344 TAP2Q03519 686 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 ITIH3Q06033 890 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 HABP2Q14520 560 aaPredicted RBP5.94□□□□□ -1.46
LTN1-204ENST00000475344 PGS1Q32NB8 556 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 KIAA0895LQ68EN5 471 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 FAM90A1Q86YD7 464 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 CPA6Q8N4T0 437 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 POC1BQ8TC44 478 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 WDCPQ9H6R7 721 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 ETAA1Q9NY74 926 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 IP6K2Q9UHH9 426 aa5.94□□□□□ -1.46
LTN1-204ENST00000475344 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.94□□□□□ -1.46
LTN1-204ENST00000475344 ANKRD62A6NC57 917 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 LINC00473A8K010 186 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 H3BUI4 141 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 SLC16A6O15403 523 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 CHEK2O96017 543 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 POU2F2P09086 479 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 FTH1P19P0C7X4 201 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 ITGALP20701 1170 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 MAP2K6P52564 334 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 HK3P52790 923 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 KIF22Q14807 665 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 PTPRRQ15256 657 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 TMPRSS9Q7Z410 1059 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 AMIGO2Q86SJ2 522 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 CHMP4CQ96CF2 233 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 ACTRT3Q9BYD9 372 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 GTPBP4Q9BZE4 634 aaKnown RBP5.93□□□□□ -1.46
LTN1-204ENST00000475344 TINAGL1Q9GZM7 467 aaPredicted RBP5.93□□□□□ -1.46
LTN1-204ENST00000475344 SIK2Q9H0K1 926 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 GPR35Q9HC97 309 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 KMT5AQ9NQR1 393 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 RAD54BQ9Y620 910 aa5.93□□□□□ -1.46
LTN1-204ENST00000475344 VWC2LB2RUY7 222 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 C1QL1O75973 258 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 CT47B1P0C2W7 299 aaPredicted RBP5.92□□□□□ -1.46
LTN1-204ENST00000475344 ELFN1P0C7U0 828 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 NR2F6P10588 404 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 GPD1P21695 349 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 NXPH1P58417 271 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 EXOSC10Q01780 885 aaKnown RBP5.92□□□□□ -1.46
LTN1-204ENST00000475344 FAM153CQ494X1 144 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 TMEM240Q5SV17 173 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 RBM20Q5T481 1227 aaKnown RBP5.92□□□□□ -1.46
LTN1-204ENST00000475344 USP37Q86T82 979 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 PPP1R3BQ86XI6 285 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 FAM46DQ8NEK8 389 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 MRPL46Q9H2W6 279 aaKnown RBP5.92□□□□□ -1.46
LTN1-204ENST00000475344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.92□□□□□ -1.46
LTN1-204ENST00000475344 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 PNPOQ9NVS9 261 aa5.92□□□□□ -1.46
LTN1-204ENST00000475344 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 PF4V1P10720 104 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 TYRP14679 529 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 LMO1P25800 156 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 NEK2P51955 445 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 EXOSC9Q06265 439 aaKnown RBP5.91□□□□□ -1.46
LTN1-204ENST00000475344 EIF2B5Q13144 721 aaKnown RBP5.91□□□□□ -1.46
LTN1-204ENST00000475344 ZKSCAN2Q63HK3 967 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 RASAL3Q86YV0 1011 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 GRAMD1CQ8IYS0 662 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 CAMKK1Q8N5S9 505 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 HOOK2Q96ED9 719 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 HAPLN3Q96S86 360 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 TTYH3Q9C0H2 523 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 ARPP21Q9UBL0 812 aaPredicted RBP5.91□□□□□ -1.46
LTN1-204ENST00000475344 ZDHHC8Q9ULC8 765 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 NOP58Q9Y2X3 529 aaKnown RBP5.91□□□□□ -1.46
LTN1-204ENST00000475344 ENTPD2Q9Y5L3 495 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 ADGRA2Q96PE1 1338 aa5.91□□□□□ -1.46
LTN1-204ENST00000475344 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.46
LTN1-204ENST00000475344 TTLL1O95922 423 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 EBLN1P0CF75 366 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 CD6P30203 668 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 KCNJ5P48544 419 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 PLS1Q14651 629 aa5.9□□□□□ -1.46
LTN1-204ENST00000475344 BRIX1Q8TDN6 353 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms