RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 KYAT1Q16773 422 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 KNOP1Q1ED39 458 aaKnown RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 SLC44A4Q53GD3 710 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 TANGO2Q6ICL3 276 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 JADE1Q6IE81 842 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 ARMCX5Q6P1M9 558 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 DSTYKQ6XUX3 929 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 MTSS1LQ765P7 747 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 FRMD5Q7Z6J6 570 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 GOLGA5Q8TBA6 731 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 ZSWIM3Q96MP5 696 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 STRA6Q9BX79 667 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 ARHGEF3Q9NR81 526 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 GDE1Q9NZC3 331 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CEP72Q9P209 647 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 UBQLN1Q9UMX0 589 aaKnown RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 SIT1Q9Y3P8 196 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 MTF2Q9Y483 593 aaPredicted RBP12.8□□□□□ -0.36
CLIP2-204ENST00000474962 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
CLIP2-204ENST00000474962 PROB1E7EW31 1015 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 LDHAP00338 332 aaKnown RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 NFICP08651 508 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 GLULP15104 373 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 ADSSP30520 456 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 TWF1Q12792 350 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 ZNF280DQ6N043 979 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 SASS6Q6UVJ0 657 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 GUF1Q8N442 669 aaKnown RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 ZNF512Q96ME7 567 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 PGLYRP2Q96PD5 576 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 TSG101Q99816 390 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
CLIP2-204ENST00000474962 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 SLC27A5Q9Y2P5 690 aa12.79□□□□□ -0.36
CLIP2-204ENST00000474962 PIRO00625 290 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 PSMA7O14818 248 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 KIAA0391O15091 583 aaKnown RBP12.78□□□□□ -0.36
CLIP2-204ENST00000474962 MOSPD3O75425 235 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 CPB1P15086 417 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 GJA1P17302 382 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 CD72P21854 359 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 GARTP22102 1010 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 NBL1P41271 181 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 STARD6P59095 220 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 DUSP4Q13115 394 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 BMT2Q1RMZ1 405 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 FAM78AQ5JUQ0 283 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 C9orf57Q5W0N0 161 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
CLIP2-204ENST00000474962 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-204ENST00000474962 USP37Q86T82 979 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 ZSWIM2Q8NEG5 633 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 AGO2Q9UKV8 859 aaKnown RBP12.78□□□□□ -0.36
CLIP2-204ENST00000474962 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 STYXL1Q9Y6J8 313 aa12.78□□□□□ -0.36
CLIP2-204ENST00000474962 DMXL1Q9Y485 3027 aa12.77□□□□□ -0.36
CLIP2-204ENST00000474962 ANO9A1A5B4 782 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 PDXKO00764 312 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 ZNF197O14709 1029 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 CLIC2O15247 247 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
CLIP2-204ENST00000474962 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-204ENST00000474962 MYL4P12829 197 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 GPR17Q13304 367 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 MORC3Q14149 939 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 IQCEQ6IPM2 695 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 PDZD4Q76G19 769 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-204ENST00000474962 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
CLIP2-204ENST00000474962 CD302Q8IX05 232 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms