RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DNAJC25Q9H1X3 360 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 CRISPLD1Q9H336 500 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 LTB4R2Q9NPC1 389 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 RBAKQ9NYW8 714 aaPredicted RBP21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 SLC27A5Q9Y2P5 690 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 CFAP54Q96N23 3096 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 KPNA7A9QM74 516 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 KIAA0391O15091 583 aaKnown RBP21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 CASP5P51878 434 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 SLC39A12Q504Y0 691 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 TMC8Q8IU68 726 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 OR10T2Q8NGX3 314 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 SHKBP1Q8TBC3 707 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 PSMG2Q969U7 264 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 SAAL1Q96ER3 474 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 TMEM209Q96SK2 561 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 LRRC3Q9BY71 257 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 TRPV5Q9NQA5 729 aa21.97■■□□□ 1.11
PDLIM4-206ENST00000474421 MAN2B1O00754 1011 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 EXTL3O43909 919 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 CUTAO60888 179 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 HSP90AA1P07900 732 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 GLULP15104 373 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 GJA1P17302 382 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 TFAMQ00059 246 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 GRM2Q14416 872 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 VEPH1Q14D04 833 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 DNAJB7Q7Z6W7 309 aaPredicted RBP21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 DCP1BQ8IZD4 617 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 IQUBQ8NA54 791 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 HEBP1Q9NRV9 189 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 KBTBD4Q9NVX7 518 aa21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 TFIP11Q9UBB9 837 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-206ENST00000474421 F5P12259 2224 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 A0A1W2PRU2 124 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 TULP1O00294 542 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 ARHGAP15Q53QZ3 475 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 WSCD1Q658N2 575 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 VITQ6UXI7 678 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 MFSD6LQ8IWD5 586 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 SPPL2BQ8TCT7 592 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 SEPT5Q99719 369 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 SPATA6Q9NWH7 488 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 ITGA11Q9UKX5 1188 aa21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 MTF2Q9Y483 593 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-206ENST00000474421 NRG2O14511 850 aaPredicted RBP21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 ZNF263O14978 683 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 LRRN2O75325 713 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 PRPF6O94906 941 aaKnown RBP21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 SP9P0CG40 484 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 CD72P21854 359 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 GDI1P31150 447 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 VIPR2P41587 438 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 E2F4Q16254 413 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 MGAT5BQ3V5L5 792 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 LRRC52Q8N7C0 313 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 FAM200AQ8TCP9 573 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 CLDN23Q96B33 292 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 CBWD1Q9BRT8 395 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 TRIM9Q9C026 710 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 MAGEF1Q9HAY2 307 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 ZNF334Q9HCZ1 680 aaPredicted RBP21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 AGAP1Q9UPQ3 857 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 FANCMQ8IYD8 2048 aa21.94■■□□□ 1.1
PDLIM4-206ENST00000474421 HEPACAM2A8MVW5 462 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 LAMTOR5O43504 91 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 ITGB3P05106 788 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 POLR2BP30876 1174 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 RPS9P46781 194 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 TSPY1Q01534 308 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 TAF12Q16514 161 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 ZNF528Q3MIS6 628 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 CNNM4Q6P4Q7 775 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 YAF2Q8IY57 180 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 TMEM86AQ8N2M4 240 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 GPD1LQ8N335 351 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 TTC9BQ8N6N2 239 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 C1orf127Q8N9H9 656 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 KCNG4Q8TDN1 519 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 NOC3LQ8WTT2 800 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 DHX58Q96C10 678 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 GCNAQ96QF7 691 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 FGFBP2Q9BYJ0 223 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 ATXN3LQ9H3M9 355 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 PCIF1Q9H4Z3 704 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 FBXO4Q9UKT5 387 aa21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 R3HCC1Q9Y3T6 440 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-206ENST00000474421 PATJQ8NI35 1801 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 GOLGA8IPA6NC78 632 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 GOLGA8JA6NMD2 632 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 EIF3DO15371 548 aaKnown RBP eCLIP21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 HUS1O60921 280 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 SOAT2O75908 522 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 ZSCAN22P10073 491 aaPredicted RBP21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 TARSP26639 723 aaKnown RBP21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 GABRR2P28476 465 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 CDC25CP30307 473 aa21.92■■□□□ 1.1
PDLIM4-206ENST00000474421 MLLT6P55198 1093 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms