RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 DGKHQ86XP1 1220 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 KIAA0319LQ8IZA0 1049 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 CPEB3Q8NE35 698 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 PROKR1Q8TCW9 393 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC9A6Q92581 669 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 TNPO1Q92973 898 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 KLHL32Q96NJ5 620 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 BBC3Q96PG8 261 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 ALOXE3Q9BYJ1 711 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 IMPG2Q9BZV3 1241 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 INO80BQ9C086 356 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 RSAD1Q9HA92 442 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 TBCCD1Q9NVR7 557 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 DMTF1Q9Y222 760 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 MED16Q9Y2X0 877 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 PLEKHM1Q9Y4G2 1056 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 HS3ST4Q9Y661 456 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 SPATA31A3Q5VYP0 1347 aa4.13□□□□□ -1.75
ECHDC1-213ENST00000474240 PRAMEF33A0A0G2JMD5 474 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF785A8K8V0 405 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 ISM1B1AKI9 464 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 FOXN3O00409 490 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 MGEA5O60502 916 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 PRAMEF10O60809 474 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 RHOBTB3O94955 611 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 NDUFA10O95299 355 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 SBK3P0C264 359 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 CYP2C9P11712 490 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 XRCC6P12956 609 aaKnown RBP eCLIP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 KCNJ5P48544 419 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 ANXA11P50995 505 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 VAV2P52735 878 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF135P52742 658 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 SOX8P57073 446 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 NOMO3P69849 1222 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 RESTQ13127 1097 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 NOMO2Q5JPE7 1267 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 COLEC12Q5KU26 742 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF362Q5T0B9 420 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 DARS2Q6PI48 645 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 OVCH2Q7RTZ1 564 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 MRGPREQ86SM8 312 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 SH2D3CQ8N5H7 860 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 PDPRQ8NCN5 879 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 TSR2Q969E8 191 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 RNF31Q96EP0 1072 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 MARS2Q96GW9 593 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 COQ10AQ96MF6 247 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 B3GNT5Q9BYG0 378 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 TINAGL1Q9GZM7 467 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 DKK2Q9UBU2 259 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 L1RE1Q9UN81 338 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 CDYLQ9Y232 598 aa4.12□□□□□ -1.75
ECHDC1-213ENST00000474240 MYO1CO00159 1063 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 POLRMTO00411 1230 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 GOLIM4O00461 696 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 USP14P54578 494 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 WNT3P56703 355 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 PSMC1P62191 440 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 POLD3Q15054 466 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 PREPLQ4J6C6 727 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 FAM160B1Q5W0V3 765 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 B3GNTL1Q67FW5 361 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 NPNTQ6UXI9 565 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 C11orf96Q7Z7L8 435 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 PPP1R3BQ86XI6 285 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 ADGRG3Q86Y34 549 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 CFAP52Q8N1V2 620 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 SLC17A8Q8NDX2 589 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 TMIEQ8NEW7 156 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 OR6B3Q8NGW1 331 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 TRIB1Q96RU8 372 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 C1orf43Q9BWL3 253 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 LRRC27Q9C0I9 530 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 CYP4F11Q9HBI6 524 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 SLAMF7Q9NQ25 335 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 INTS13Q9NVM9 706 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 PCDHA1Q9Y5I3 950 aa4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 FRMPD2Q68DX3 1309 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-213ENST00000474240 TRGV11A0A075B6L2 103 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PIPSLA2A3N6 862 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 TOR1BO14657 336 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PRPF3O43395 683 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 TRIAP1O43715 76 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 ORC4O43929 436 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 CAND2O75155 1236 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 ATXN1LP0C7T5 689 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 HKR1P10072 659 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 PIM1P11309 404 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 EN2P19622 333 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 ITGALP20701 1170 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 FDXRP22570 491 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 NR4A1P22736 598 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 VIPR2P41587 438 aa4.1□□□□□ -1.75
ECHDC1-213ENST00000474240 FAM189BP81408 668 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms