RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TBATAQ96M53 351 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 RMDN3Q96TC7 470 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 NDC1Q9BTX1 674 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 C12orf65Q9H3J6 166 aaKnown RBP5.02□□□□□ -1.61
BRCA1-212ENST00000473961 NELFAQ9H3P2 528 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 WDR26Q9H7D7 661 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 GPR35Q9HC97 309 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 NECTIN3Q9NQS3 549 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 PGAP2Q9UHJ9 254 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 HDAC9Q9UKV0 1011 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 SLC39A10Q9ULF5 831 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 SLC4A7Q9Y6M7 1214 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 ZMYM3Q14202 1370 aa5.02□□□□□ -1.61
BRCA1-212ENST00000473961 TCRBV7S2A1N4TA0A589 114 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF785A8K8V0 405 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 PODXLO00592 558 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 IPO13O94829 963 aaKnown RBP5.01□□□□□ -1.61
BRCA1-212ENST00000473961 UNC5CO95185 931 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
BRCA1-212ENST00000473961 GNAT2P19087 354 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 IL1R2P27930 398 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 DDIT3P35638 169 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 PHKA1P46020 1223 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 POLE2P56282 527 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 WNT3P56703 355 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 RAP2BP61225 183 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 PSMC1P62191 440 aaKnown RBP5.01□□□□□ -1.61
BRCA1-212ENST00000473961 DLX2Q07687 328 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-212ENST00000473961 FOXO1Q12778 655 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 CTBP1Q13363 440 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 RIN1Q13671 783 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 VWA3BQ502W6 1294 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 ATXN7L2Q5T6C5 722 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-212ENST00000473961 MICU3Q86XE3 530 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 DNAJC5GQ8N7S2 189 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 TFAP2CQ92754 450 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 PPP1R9BQ96SB3 815 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 GPHA2Q96T91 129 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 CNPPD1Q9BV87 410 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 STK31Q9BXU1 1019 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 ENKD1Q9H0I2 346 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 SMURF2Q9HAU4 748 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 PRDM16Q9HAZ2 1276 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 DACT1Q9NYF0 836 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 LRFN1Q9P244 771 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 MAN2B2Q9Y2E5 1009 aa5.01□□□□□ -1.61
BRCA1-212ENST00000473961 A0A087WWL8 130 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 UBE2QL1A1L167 161 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 TBKBP1A7MCY6 615 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 SYT5O00445 386 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 HOXA3O43365 443 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 FSHBP01225 129 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 RPS19P39019 145 aaKnown RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 MAPK9P45984 424 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 SLC11A2P49281 568 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 ZNF135P52742 658 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 HMGA2P52926 109 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 ADAM8P78325 824 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 HTRA4P83105 476 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 PIGFQ07326 219 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 CNGB1Q14028 1251 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 SLC29A2Q14542 456 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 UBXN2BQ14CS0 331 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 SURF1Q15526 300 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 PFKFB4Q16877 469 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 INSCQ1MX18 579 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 BMT2Q1RMZ1 405 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 RNF151Q2KHN1 245 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 VMACQ2NL98 169 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 TUBB8Q3ZCM7 444 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 UTP14CQ5TAP6 766 aaKnown RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 UNC13DQ70J99 1090 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 UBE3BQ7Z3V4 1068 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 FRMD5Q7Z6J6 570 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 ADGRE4PQ86SQ3 457 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 USP37Q86T82 979 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 GATAD2AQ86YP4 633 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 CACNA2D3Q8IZS8 1091 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 SLC15A4Q8N697 577 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 OR10H5Q8NGA6 315 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 MAML1Q92585 1016 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 LRRC46Q96FV0 321 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 SNX27Q96L92 541 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 HEPHQ9BQS7 1158 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 TMEM120AQ9BXJ8 343 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 TINAGL1Q9GZM7 467 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 ZCWPW1Q9H0M4 648 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 KCNH6Q9H252 994 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 ZHX3Q9H4I2 956 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 HEYLQ9NQ87 328 aaPredicted RBP5□□□□□ -1.61
BRCA1-212ENST00000473961 SLC23A1Q9UHI7 598 aa5□□□□□ -1.61
BRCA1-212ENST00000473961 LOC102723971A0A1B0GUV8 181 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 M0QYG6 137 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 CCP110O43303 1012 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 MFAP3LO75121 409 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 SBK3P0C264 359 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 DHRS4L1P0CG22 281 aa4.99□□□□□ -1.61
BRCA1-212ENST00000473961 PIM1P11309 404 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-212ENST00000473961 PDIA3P30101 505 aaKnown RBP4.99□□□□□ -1.61
BRCA1-212ENST00000473961 VIPR2P41587 438 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms