RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SCOCQ9UIL1 159 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 LY6G6EA0A0G2JKS1 128 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 QSOX1O00391 747 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 SMAD6O43541 496 aaKnown RBP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 USP1O94782 785 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 MTHFD1P11586 935 aaKnown RBP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 PCSK1P29120 753 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 HNRNPMP52272 730 aaKnown RBP eCLIP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 PABPC4Q13310 644 aaKnown RBP eCLIP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 ZNF618Q5T7W0 954 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 AOPEPQ8N6M6 819 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 NR4A3Q92570 626 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 TLR10Q9BXR5 811 aa2.86□□□□□ -1.95
CCDC39-203ENST00000473854 ACE2Q9BYF1 805 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 RUVBL1Q9Y265 456 aaKnown RBP2.86□□□□□ -1.95
CCDC39-203ENST00000473854 TCF20Q9UGU0 1960 aaKnown RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 ZNF213O14771 459 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 SOAT2O75908 522 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 AGFG2O95081 481 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 FKBP9O95302 570 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 RHOP08100 348 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 NHLRC4P0CG21 123 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 HOXA4Q00056 320 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 MGAT2Q10469 447 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 RBMS2Q15434 407 aaKnown RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 UBAP2Q5T6F2 1119 aaKnown RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 FKBP9P1Q75LS8 142 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 TMPRSS9Q7Z410 1059 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 FAM9AQ8IZU1 332 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-203ENST00000473854 CAMKK2Q96RR4 588 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 IFT122Q9HBG6 1241 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 EMC7Q9NPA0 242 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 PDGFCQ9NRA1 345 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 POT1Q9NUX5 634 aa2.85□□□□□ -1.95
CCDC39-203ENST00000473854 FNDC1Q4ZHG4 1894 aaPredicted RBP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 F5H697 171 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 ABLIM3O94929 683 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 CHRM5P08912 532 aaPredicted RBP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 DDCP20711 480 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 IL1R2P27930 398 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 GTF2F1P35269 517 aaKnown RBP eCLIP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 EEFSECP57772 596 aaKnown RBP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 RHDQ02161 417 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 MALLQ13021 153 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 TBCCQ15814 346 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 MUM1Q2TAK8 710 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 LRRTM3Q86VH5 581 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 CHSY1Q86X52 802 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 DCP1BQ8IZD4 617 aaKnown RBP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 CFAP52Q8N1V2 620 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.84□□□□□ -1.95
CCDC39-203ENST00000473854 TSPEARQ8WU66 669 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 SMOQ99835 787 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 ACTRT3Q9BYD9 372 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 TTC3P53804 2025 aa2.84□□□□□ -1.95
CCDC39-203ENST00000473854 H0YIZ8 118 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 H3BNX3 289 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 H7C1Q1 480 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 NEMP1O14524 444 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 DSCR3O14972 297 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 CRYABP02511 175 aaKnown RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 ANXA1P04083 346 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 ATP5F1P24539 256 aaPredicted RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PCSK6P29122 969 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 ADCYAP1R1P41586 468 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 NDUFV1P49821 464 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 CTXN1P60606 82 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 MC2RQ01718 297 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PPP3CAQ08209 521 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 RBL2Q08999 1139 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PABPC1LQ4VXU2 614 aaKnown RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 C10orf25Q5T742 122 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 UTP14CQ5TAP6 766 aaKnown RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 TAPT1Q6NXT6 567 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 TRIM72Q6ZMU5 477 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PIM3Q86V86 326 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 CCHCR1Q8TD31 782 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 TMEM255BQ8WV15 326 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 RNPC3Q96LT9 517 aaKnown RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 TRIB1Q96RU8 372 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PACSIN1Q9BY11 444 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 SLCO5A1Q9H2Y9 848 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 FOXP1Q9H334 677 aaPredicted RBP2.83□□□□□ -1.96
CCDC39-203ENST00000473854 JKAMPQ9P055 326 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 PI4KBQ9UBF8 816 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 EDARQ9UNE0 448 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 SH2B3Q9UQQ2 575 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 SQORQ9Y6N5 450 aa2.83□□□□□ -1.96
CCDC39-203ENST00000473854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.82□□□□□ -1.96
CCDC39-203ENST00000473854 LACTBL1A8MY62 500 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 POC1B-GALNT4F8VUJ3 575 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 UBE2Q2LH0YL09 131 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 GTPBP1O00178 669 aaKnown RBP2.82□□□□□ -1.96
CCDC39-203ENST00000473854 ULK1O75385 1050 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 PRF1P14222 555 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 JUPP14923 745 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 SESN3P58005 492 aa2.82□□□□□ -1.96
CCDC39-203ENST00000473854 CCT2P78371 535 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms