RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	BRIP1	Q9BX63	1249 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	ZNF518B	Q9C0D4	1074 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	SMURF2	Q9HAU4	748 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	ARFGAP3	Q9NP61	516 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	SERHL	Q9NQF3	203 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	STK32B	Q9NY57	414 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	FNIP2	Q9P278	1114 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	CPNE7	Q9UBL6	633 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	CORO2B	Q9UQ03	480 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	PLEKHM1	Q9Y4G2	1056 aa		5.7	□□□□□ -1.5
BBX-223	ENST00000473542	KLRG2	A4D1S0	409 aa	Predicted RBP	5.69	□□□□□ -1.5
BBX-223	ENST00000473542	BTN3A1	O00481	513 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	KPNA5	O15131	536 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	TBC1D4	O60343	1298 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	FGF18	O76093	207 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	HIBADH	P31937	336 aa	Known RBP	5.69	□□□□□ -1.5
BBX-223	ENST00000473542	KCNJ5	P48544	419 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	NOMO3	P69849	1222 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	RAB32	Q13637	225 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	GRAMD1B	Q3KR37	738 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	FAM209B	Q5JX69	171 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	NAIF1	Q69YI7	327 aa	Predicted RBP	5.69	□□□□□ -1.5
BBX-223	ENST00000473542	C1orf228	Q6PIY5	440 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	UBE3B	Q7Z3V4	1068 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	DNAJC10	Q8IXB1	793 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	ANKRD35	Q8N283	1001 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	CELF5	Q8N6W0	485 aa	Known RBP	5.69	□□□□□ -1.5
BBX-223	ENST00000473542	FBXO34	Q9NWN3	711 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	CEP72	Q9P209	647 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	COL20A1	Q9P218	1284 aa		5.69	□□□□□ -1.5
BBX-223	ENST00000473542	PCSK5	Q92824	1860 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	MBD3L3	A6NE82	208 aa	Predicted RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	POM121B	A6NF01	834 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	PARP1	P09874	1014 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	KRT4	P19013	534 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	RAP2B	P61225	183 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	SLC13A2	Q13183	592 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	STK3	Q13188	491 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	DHX8	Q14562	1220 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	ZRSR2	Q15696	482 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	ELAVL1	Q15717	326 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	UTP14C	Q5TAP6	766 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	HTR3D	Q70Z44	454 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	XYLT1	Q86Y38	959 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	MYLK4	Q86YV6	388 aa	Predicted RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	ZNF483	Q8TF39	744 aa	Predicted RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	NUP133	Q8WUM0	1156 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	MAML1	Q92585	1016 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	MIEF2	Q96C03	454 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	EIF2A	Q9BY44	585 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	WDR12	Q9GZL7	423 aa	Known RBP	5.68	□□□□□ -1.5
BBX-223	ENST00000473542	GSTO2	Q9H4Y5	243 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	SH3BP1	Q9Y3L3	701 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542	TNFRSF18	Q9Y5U5	241 aa		5.68	□□□□□ -1.5
BBX-223	ENST00000473542		A0A087WWL8	130 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542		A0A1W2PPC4	97 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	TCEA3	O75764	348 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	DNAJB5	O75953	348 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	ADH4	P08319	380 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	HTRA4	P83105	476 aa	Predicted RBP	5.67	□□□□□ -1.5
BBX-223	ENST00000473542	CHAF1A	Q13111	956 aa	Predicted RBP	5.67	□□□□□ -1.5
BBX-223	ENST00000473542	CSRP2	Q16527	193 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	ERAP2	Q6P179	960 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542		Q6ZPA2	131 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	MICU3	Q86XE3	530 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	SDR16C5	Q8N3Y7	309 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	ATP11C	Q8NB49	1132 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	OR10H5	Q8NGA6	315 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	ZG16B	Q96DA0	208 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	CPEB1	Q9BZB8	566 aa	Known RBP	5.67	□□□□□ -1.5
BBX-223	ENST00000473542	CERS4	Q9HA82	394 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	SLAMF7	Q9NQ25	335 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	A1CF	Q9NQ94	594 aa	Known RBP	5.67	□□□□□ -1.5
BBX-223	ENST00000473542	SLC2A4RG	Q9NR83	387 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	SACM1L	Q9NTJ5	587 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	LRCH1	Q9Y2L9	728 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	DMRT1	Q9Y5R6	373 aa		5.67	□□□□□ -1.5
BBX-223	ENST00000473542	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
BBX-223	ENST00000473542	CDHR4	A6H8M9	788 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	DRGX	A6NNA5	263 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	CLCA1	A8K7I4	914 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542		F8W8V4	182 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	APOL1	O14791	398 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	AGFG2	O95081	481 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	PIM1	P11309	404 aa	Predicted RBP	5.66	□□□□□ -1.5
BBX-223	ENST00000473542	CKB	P12277	381 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	GCSH	P23434	173 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	KLRC1	P26715	233 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	WNT3	P56703	355 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	HHEX	Q03014	270 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	AMOT	Q4VCS5	1084 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	PRR16	Q569H4	304 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.66	□□□□□ -1.5
BBX-223	ENST00000473542	PPP1R32	Q7Z5V6	425 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	USP37	Q86T82	979 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	D2HGDH	Q8N465	521 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	TMEM176A	Q96HP8	235 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	CNPPD1	Q9BV87	410 aa		5.66	□□□□□ -1.5

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