RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ZNF445P59923 1031 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 KCNC3Q14003 757 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 RAB33AQ14088 237 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 VWA3BQ502W6 1294 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 MIIPQ5JXC2 388 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 MAFAQ8NHW3 353 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 FAM200AQ8TCP9 573 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 PI4K2AQ9BTU6 479 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 BCO2Q9BYV7 579 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 NIF3L1Q9GZT8 377 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 NDST4Q9H3R1 872 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 TSPY26PQ9H489 355 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 CBX8Q9HC52 389 aa20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 NXF1Q9UBU9 619 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 LIMA1Q9UHB6 759 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-207ENST00000473420 TPM2P07951 284 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 SRGAP2BP0DMP2 458 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 OR1D2P34982 312 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 ASPAP45381 313 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 KRT31Q15323 416 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 SPOPLQ6IQ16 392 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 RSPO2Q6UXX9 243 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 TMEM184AQ6ZMB5 413 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 EHBP1Q8NDI1 1231 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 LMO3Q8TAP4 145 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 SLC22A17Q8WUG5 538 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 RTP3Q9BQQ7 232 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 FAM124BQ9H5Z6 455 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 APOBEC3GQ9HC16 384 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 POLIQ9UNA4 740 aa20.33■□□□□ 0.85
CTDSP1-207ENST00000473420 LRRN2O75325 713 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 GLUD1P00367 558 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 CDK11BP21127 795 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 GTF2F1P35269 517 aaKnown RBP eCLIP20.32■□□□□ 0.841e-8■■■□□ 18.5
CTDSP1-207ENST00000473420 TPM4P67936 248 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 ROR1Q01973 937 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 ADAM15Q13444 863 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 CTC1Q2NKJ3 1217 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 LILRA6Q6PI73 481 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 HDAC7Q8WUI4 952 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 CASP10Q92851 521 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 PABPC5Q96DU9 382 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 ACBD6Q9BR61 282 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 IGFLR1Q9H665 355 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 CYP3A43Q9HB55 503 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 DDX43Q9NXZ2 648 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 DPP7Q9UHL4 492 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 HCFC2Q9Y5Z7 792 aa20.32■□□□□ 0.84
CTDSP1-207ENST00000473420 LRRC10BA6NIK2 292 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 ADAM12O43184 909 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 TGM5O43548 720 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 PCSK1P29120 753 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 CCDC85BQ15834 202 aaPredicted RBP20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 TPGS2Q68CL5 300 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 ELMSAN1Q6PJG2 1045 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 SCARA5Q6ZMJ2 495 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 GBP6Q6ZN66 633 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 OSTM1Q86WC4 334 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 TTC39CQ8N584 583 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 OR10T2Q8NGX3 314 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 ZNF461Q8TAF7 563 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 NT5C1BQ96P26 610 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 MRPL45Q9BRJ2 306 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 ZCWPW1Q9H0M4 648 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 SNX25Q9H3E2 840 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 SMYD3Q9H7B4 428 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 TAB2Q9NYJ8 693 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 GCNT4Q9P109 453 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 MAFFQ9ULX9 164 aa20.31■□□□□ 0.84
CTDSP1-207ENST00000473420 WDR27A2RRH5 827 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 ABLIM3O94929 683 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 GLP2RO95838 553 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 CPB1P15086 417 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 TBXAS1P24557 533 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 TSPY1Q01534 308 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 SMARCB1Q12824 385 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 GPR17Q13304 367 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 LUZP1Q86V48 1076 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 PALB2Q86YC2 1186 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 VN1R2Q8NFZ6 395 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 ELMO3Q96BJ8 720 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 INTS2Q9H0H0 1204 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 PLEKHA4Q9H4M7 779 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 DZANK1Q9NVP4 752 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 FBXW11Q9UKB1 542 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 CDH9Q9ULB4 789 aa20.3■□□□□ 0.84
CTDSP1-207ENST00000473420 GOLGA6L19H0YKK7 550 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 LINC01565O15544 149 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 EPCAMP16422 314 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 GNL1P36915 607 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 COPB1P53618 953 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 INCA1Q0VD86 236 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 EXOC3L4Q17RC7 722 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 INTS6LQ5JSJ4 861 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 RTL10Q7L3V2 364 aa20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 APTXQ7Z2E3 356 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-207ENST00000473420 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms