RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 WNT7BP56706 349 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 UBXN2BQ14CS0 331 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 E2F4Q16254 413 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 SLC39A12Q504Y0 691 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 WSCD1Q658N2 575 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 VITQ6UXI7 678 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF852Q6ZMS4 543 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 TPRG1Q6ZUI0 275 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 LRRTM3Q86VH5 581 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 BRSK2Q8IWQ3 736 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 SYCP3Q8IZU3 236 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 THEM5Q8N1Q8 247 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 DEPDC1BQ8WUY9 529 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 IRF7Q92985 503 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 PSMG2Q969U7 264 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 E2F7Q96AV8 911 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 CLDN23Q96B33 292 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF396Q96N95 335 aaPredicted RBP16.51■□□□□ 0.23
VTI1A-203ENST00000472892 LRRC27Q9C0I9 530 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 TMEM206Q9H813 350 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 BRD9Q9H8M2 597 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF334Q9HCZ1 680 aaPredicted RBP16.51■□□□□ 0.23
VTI1A-203ENST00000472892 KBTBD4Q9NVX7 518 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 ANK1P16157 1881 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 EXTL3O43909 919 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 SOAT2O75908 522 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
VTI1A-203ENST00000472892 PNPLA4P41247 253 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 MAGEA9P43362 315 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 SMARCB1Q12824 385 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 FZD5Q13467 585 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 SV2CQ496J9 727 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 ITIH5Q86UX2 942 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 MFSD6LQ8IWD5 586 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF687Q8N1G0 1237 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 CXorf38Q8TB03 319 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 C2orf15Q8WU43 125 aaKnown RBP16.5■□□□□ 0.23
VTI1A-203ENST00000472892 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
VTI1A-203ENST00000472892 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
VTI1A-203ENST00000472892 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
VTI1A-203ENST00000472892 MRPS17Q9Y2R5 130 aaKnown RBP16.5■□□□□ 0.23
VTI1A-203ENST00000472892 MAN2B1O00754 1011 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 NCAM2O15394 837 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 YEATS4O95619 227 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 FGF19O95750 216 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
VTI1A-203ENST00000472892 TARSP26639 723 aaKnown RBP16.49■□□□□ 0.23
VTI1A-203ENST00000472892 GDI1P31150 447 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 SCN1AP35498 2009 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 RPS9P46781 194 aaKnown RBP16.49■□□□□ 0.23
VTI1A-203ENST00000472892 TFAMQ00059 246 aaKnown RBP16.49■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF528Q3MIS6 628 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 GAREM2Q75VX8 874 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 C1orf127Q8N9H9 656 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 RSPRY1Q96DX4 576 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF560Q96MR9 790 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 CFAP54Q96N23 3096 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 MKNK1Q9BUB5 465 aa16.49■□□□□ 0.23
VTI1A-203ENST00000472892 SPATA6Q9NWH7 488 aaPredicted RBP16.49■□□□□ 0.23
VTI1A-203ENST00000472892 GOLGA8IPA6NC78 632 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 GOLGA8JA6NMD2 632 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 HEPACAM2A8MVW5 462 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ARNTLO00327 626 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 KIAA0391O15091 583 aaKnown RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 CUTAO60888 179 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ITGB3P05106 788 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ATF6P18850 670 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 MLLT6P55198 1093 aaPredicted RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 MGAT5BQ3V5L5 792 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 SCARA3Q6AZY7 606 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 SHC4Q6S5L8 630 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ARID3BQ8IVW6 561 aaPredicted RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 DCP1BQ8IZD4 617 aaKnown RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ADSSL1Q8N142 457 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 CSGALNACT2Q8N6G5 542 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 IQUBQ8NA54 791 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 TRIM9Q9C026 710 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 ATXN3LQ9H3M9 355 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 PCIF1Q9H4Z3 704 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 FBXO4Q9UKT5 387 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 AGAP1Q9UPQ3 857 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 R4GN57 208 aa16.48■□□□□ 0.23
VTI1A-203ENST00000472892 PTPRZ1P23471 2315 aaPredicted RBP16.48■□□□□ 0.23
VTI1A-203ENST00000472892 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
VTI1A-203ENST00000472892 NCANO14594 1321 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 ZNF263O14978 683 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 LAMTOR5O43504 91 aa16.47■□□□□ 0.23
VTI1A-203ENST00000472892 LMNAP02545 664 aaKnown RBP16.47■□□□□ 0.23
VTI1A-203ENST00000472892 HAPLN1P10915 354 aaPredicted RBP16.47■□□□□ 0.23
VTI1A-203ENST00000472892 GABRR2P28476 465 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms