RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	PSMC3	P17980	439 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	PNPLA4	P41247	253 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	MAGEA9	P43362	315 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	CASP5	P51878	434 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	TFAM	Q00059	246 aa	Known RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	AMPD3	Q01432	767 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	GRM2	Q14416	872 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	VEPH1	Q14D04	833 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	TEAD2	Q15562	447 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	CENPP	Q6IPU0	288 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZNF852	Q6ZMS4	543 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	ASCL5	Q7RTU5	278 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	C1orf210	Q8IVY1	113 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	EFCAB13	Q8IY85	973 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	ATAD1	Q8NBU5	361 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	OR10T2	Q8NGX3	314 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	SHKBP1	Q8TBC3	707 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	FAM200A	Q8TCP9	573 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	NOC3L	Q8WTT2	800 aa	Known RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	C2orf15	Q8WU43	125 aa	Known RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	CACTIN	Q8WUQ7	758 aa	Known RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	DEPDC1B	Q8WUY9	529 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	IRF7	Q92985	503 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	SNX21	Q969T3	373 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	PSMG2	Q969U7	264 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	TMEM209	Q96SK2	561 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	SEPT5	Q99719	369 aa	Predicted RBP	9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	OSBPL6	Q9BZF3	934 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	PLA2G2F	Q9BZM2	168 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	CRISPLD1	Q9H336	500 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	TMEM206	Q9H813	350 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	BRD9	Q9H8M2	597 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	TRPV4	Q9HBA0	871 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	LTB4R2	Q9NPC1	389 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	DLGAP2	Q9P1A6	1054 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807	SLC27A5	Q9Y2P5	690 aa		9.63	□□□□□ -0.87
CHEK2-223	ENST00000472807		A0A1W2PRU2	124 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	KPNA7	A9QM74	516 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	MAN2B1	O00754	1011 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	NRG2	O14511	850 aa	Predicted RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	KIAA0391	O15091	583 aa	Known RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	NCAM2	O15394	837 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	EXTL3	O43909	919 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	CUTA	O60888	179 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	MOSPD3	O75425	235 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ITGB3	P05106	788 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	GLUL	P15104	373 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	GJA1	P17302	382 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	POLR2B	P30876	1174 aa	Known RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	TUFM	P49411	452 aa	Known RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ASIC1	P78348	528 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	TSPY1	Q01534	308 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	SMARCB1	Q12824	385 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	TAF12	Q16514	161 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	MGAT5B	Q3V5L5	792 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ARHGAP15	Q53QZ3	475 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	WSCD1	Q658N2	575 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	VIT	Q6UXI7	678 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	TMC8	Q8IU68	726 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	YAF2	Q8IY57	180 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	DCP1B	Q8IZD4	617 aa	Known RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	TTC9B	Q8N6N2	239 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	IQUB	Q8NA54	791 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	SPPL2B	Q8TCT7	592 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	KCNG4	Q8TDN1	519 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	E2F7	Q96AV8	911 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	DHX58	Q96C10	678 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZSWIM3	Q96MP5	696 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	GCNA	Q96QF7	691 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	NELL2	Q99435	816 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	CBWD1	Q9BRT8	395 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	FGFBP2	Q9BYJ0	223 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZCWPW1	Q9H0M4	648 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	DNAJC25	Q9H1X3	360 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	SEMA4A	Q9H3S1	761 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	MAGEF1	Q9HAY2	307 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	HEBP1	Q9NRV9	189 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	SPATA6	Q9NWH7	488 aa	Predicted RBP	9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	ITGA11	Q9UKX5	1188 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	DCHS1	Q96JQ0	3298 aa		9.62	□□□□□ -0.87
CHEK2-223	ENST00000472807	COL4A3	Q01955	1670 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	OTOGL	Q3ZCN5	2332 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	TICRR	Q7Z2Z1	1910 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	DNAH14	Q0VDD8	3507 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	GOLGA8IP	A6NC78	632 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	GOLGA8J	A6NMD2	632 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	DPYSL4	O14531	572 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZNF263	O14978	683 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	LAMTOR5	O43504	91 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	LRRN2	O75325	713 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	SOAT2	O75908	522 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	PRPF6	O94906	941 aa	Known RBP	9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	KRT19	P08727	400 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	TMEM191B	P0C7N4	346 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	ZSCAN22	P10073	491 aa	Predicted RBP	9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	CD72	P21854	359 aa		9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	TARS	P26639	723 aa	Known RBP	9.61	□□□□□ -0.87
CHEK2-223	ENST00000472807	CDC25C	P30307	473 aa		9.61	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms