RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NOX1Q9Y5S8 564 aa7.07□□□□□ -1.28
CLK1-209ENST00000472679 CDKL5O76039 1030 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 ABHD16AO95870 558 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 PIM1P11309 404 aaPredicted RBP7.06□□□□□ -1.28
CLK1-209ENST00000472679 PTGS2P35354 604 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 SCAPQ12770 1279 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 SPDYE7PQ495Y7 208 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 COBLL1Q53SF7 1204 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 TAF2Q6P1X5 1199 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 KSR2Q6VAB6 950 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 TMPRSS9Q7Z410 1059 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 SYNE4Q8N205 404 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 POC1BQ8TC44 478 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 KBTBD7Q8WVZ9 684 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 DDX17Q92841 729 aaKnown RBP7.06□□□□□ -1.28
CLK1-209ENST00000472679 TTC17Q96AE7 1141 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 TMEM74BQ9NUR3 256 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 STK32BQ9NY57 414 aa7.06□□□□□ -1.28
CLK1-209ENST00000472679 BTN3A1O00481 513 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 APAF1O14727 1248 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 FRS3O43559 492 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 ZNF202O95125 648 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 GRPP07492 148 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 MYF5P13349 255 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 TRIM27P14373 513 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 EN2P19622 333 aaPredicted RBP7.05□□□□□ -1.28
CLK1-209ENST00000472679 SUMO3P55854 103 aaPredicted RBP7.05□□□□□ -1.28
CLK1-209ENST00000472679 CD300EQ496F6 205 aaPredicted RBP7.05□□□□□ -1.28
CLK1-209ENST00000472679 FAM160B1Q5W0V3 765 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 ARHGEF19Q8IW93 802 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 PSD4Q8NDX1 1056 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 ASB10Q8WXI3 467 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 MAML1Q92585 1016 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 TMEM125Q96AQ2 219 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 APIPQ96GX9 242 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 DPH1Q9BZG8 443 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 UNKLQ9H9P5 680 aaKnown RBP7.05□□□□□ -1.28
CLK1-209ENST00000472679 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 GALNT9Q9HCQ5 603 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 SRRDQ9UH36 339 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 PLEKHM1Q9Y4G2 1056 aa7.05□□□□□ -1.28
CLK1-209ENST00000472679 PRAMEF33A0A0G2JMD5 474 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 A0A1W2PS29 197 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 PRAMEF10O60809 474 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 CAND2O75155 1236 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 ANXA11P50995 505 aaKnown RBP7.04□□□□□ -1.28
CLK1-209ENST00000472679 VAV2P52735 878 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 UCP3P55916 312 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 FMO1Q01740 532 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 GUCY1B3Q02153 619 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 CTBP1Q13363 440 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 POLD3Q15054 466 aaPredicted RBP7.04□□□□□ -1.28
CLK1-209ENST00000472679 KCNV1Q6PIU1 500 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 CLNKQ7Z7G1 428 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 GPR149Q86SP6 731 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 CCAR1Q8IX12 1150 aaKnown RBP7.04□□□□□ -1.28
CLK1-209ENST00000472679 OR6B3Q8NGW1 331 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 WDR11Q9BZH6 1224 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 SIK2Q9H0K1 926 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 ARNT2Q9HBZ2 717 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
CLK1-209ENST00000472679 MYADML2A6NDP7 307 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 TOR1BO14657 336 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 DCLK1O15075 740 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 MGEA5O60502 916 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 FOSP01100 380 aaPredicted RBP7.03□□□□□ -1.28
CLK1-209ENST00000472679 C6P13671 934 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 BRAFP15056 766 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 TACR2P21452 398 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 SLC11A2P49281 568 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 MXRA7P84157 204 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 PURAQ00577 322 aaKnown RBP7.03□□□□□ -1.28
CLK1-209ENST00000472679 FPGSQ05932 587 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 DYRK1AQ13627 763 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 HLTFQ14527 1009 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLK1-209ENST00000472679 CNGA2Q16280 664 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 ZNF783Q6ZMS7 281 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 NOL8Q76FK4 1167 aaKnown RBP7.03□□□□□ -1.28
CLK1-209ENST00000472679 ADGRG5Q8IZF4 528 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 FUBP1Q96AE4 644 aaKnown RBP7.03□□□□□ -1.28
CLK1-209ENST00000472679 SLC46A1Q96NT5 459 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 SPATA5L1Q9BVQ7 753 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 TTYH3Q9C0H2 523 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 LRRC27Q9C0I9 530 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 SERHL2Q9H4I8 314 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 XPR1Q9UBH6 696 aa7.03□□□□□ -1.28
CLK1-209ENST00000472679 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 TMEM233B4DJY2 109 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 PQBP1O60828 265 aaKnown RBP7.02□□□□□ -1.29
CLK1-209ENST00000472679 MAP4K4O95819 1239 aaPredicted RBP7.02□□□□□ -1.29
CLK1-209ENST00000472679 KRT18P05783 430 aaKnown RBP7.02□□□□□ -1.29
CLK1-209ENST00000472679 SLC5A1P13866 664 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 GATA3P23771 443 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 SLC13A2Q13183 592 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 MAP9Q49MG5 647 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 C3orf38Q5JPI3 329 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 LY6G5CQ5SRR4 150 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
CLK1-209ENST00000472679 DBX2Q6ZNG2 339 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms