RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MTSS1LQ765P7 747 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 PDZD4Q76G19 769 aaPredicted RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 DNAJB7Q7Z6W7 309 aaPredicted RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 TMEM150AQ86TG1 271 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 RASSF8Q8NHQ8 419 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 ZSCAN18Q8TBC5 510 aaPredicted RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 SMARCD2Q92925 531 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 ELSPBP1Q96BH3 223 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 FAM213AQ9BRX8 229 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 ST6GALNAC4Q9H4F1 302 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 PDE11AQ9HCR9 933 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 RBM12Q9NTZ6 932 aaKnown RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 NDRG2Q9UN36 371 aaKnown RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 SCN1AP35498 2009 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 OTOL1A6NHN0 477 aaPredicted RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 HEPACAM2A8MVW5 462 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 ATP2C2O75185 946 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 PRAMEF12O95522 483 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 IDEP14735 1019 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 TYMPP19971 482 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 RFX1P22670 979 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 ACAT1P24752 427 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 TNK2Q07912 1038 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 E2F4Q16254 413 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 L1TD1Q5T7N2 865 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 CYP4A22Q5TCH4 519 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 SV2BQ7L1I2 683 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 ARID3BQ8IVW6 561 aaPredicted RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 GRAMD1CQ8IYS0 662 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 SUMF1Q8NBK3 374 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 LINC00301Q8NCQ3 95 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 KCNG4Q8TDN1 519 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 NOC3LQ8WTT2 800 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 POMGNT1Q8WZA1 660 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 CLDN23Q96B33 292 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 PYM1Q9BRP8 204 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 SLC46A2Q9BY10 475 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 ZCWPW1Q9H0M4 648 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 MRPL44Q9H9J2 332 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 UPF2Q9HAU5 1272 aaKnown RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 ZFP14Q9HCL3 533 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 SPATA6Q9NWH7 488 aaPredicted RBP8.74□□□□□ -1.01
USP48-207ENST00000471752 SIX4Q9UIU6 781 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 L1RE1Q9UN81 338 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 CCL26Q9Y258 94 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 NME7Q9Y5B8 376 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 SDK1Q7Z5N4 2213 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 MYH15Q9Y2K3 1946 aa8.74□□□□□ -1.01
USP48-207ENST00000471752 CHD8Q9HCK8 2581 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 CITO14578 2027 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 FRMD3A2A2Y4 597 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 SLC26A4O43511 780 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 STX6O43752 255 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 GCNT3O95395 438 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 CYP11A1P05108 521 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 TDGF1P13385 188 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 HMGA1P17096 107 aaKnown RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 CCNE1P24864 410 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 LMO2P25791 158 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 POLR2BP30876 1174 aaKnown RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 TFAMQ00059 246 aaKnown RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 PRKCQQ04759 706 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 DDR2Q16832 855 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 IQCEQ6IPM2 695 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 PKN3Q6P5Z2 889 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 SHC4Q6S5L8 630 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 RTL10Q7L3V2 364 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 USP37Q86T82 979 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 CBWD2Q8IUF1 395 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 MFSD6LQ8IWD5 586 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 KIAA2013Q8IYS2 634 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 PDCL2Q8N4E4 241 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 CHFRQ96EP1 664 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 SEPT5Q99719 369 aaPredicted RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 TRMT61BQ9BVS5 477 aaKnown RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
USP48-207ENST00000471752 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 BRD9Q9H8M2 597 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 LMAN1LQ9HAT1 526 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 TRPV4Q9HBA0 871 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 ASAH2Q9NR71 780 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 PANK4Q9NVE7 773 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 GTSE1Q9NYZ3 720 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 KCNG1Q9UIX4 513 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 AGAP1Q9UPQ3 857 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 EPG5Q9HCE0 2579 aa8.73□□□□□ -1.01
USP48-207ENST00000471752 MYH11P35749 1972 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 OR6C75A6NL08 312 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 SLC38A8A6NNN8 435 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 KPNA7A9QM74 516 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 H0YCG3 227 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 ZNF197O14709 1029 aa8.72□□□□□ -1.01
USP48-207ENST00000471752 MICAL2O94851 1124 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms