RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SLC44A4Q53GD3 710 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 ITIH5Q86UX2 942 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 SPATA18Q8TC71 538 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 ZNF507Q8TCN5 953 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 SPPL2BQ8TCT7 592 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 DNASE1L2Q92874 299 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 SMARCD2Q92925 531 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 E2F7Q96AV8 911 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 TCEAL4Q96EI5 215 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 ASB16Q96NS5 453 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 PPP1R9BQ96SB3 815 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 NELL2Q99435 816 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 CBWD1Q9BRT8 395 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
HMGN1-211ENST00000471260 FGFBP2Q9BYJ0 223 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
HMGN1-211ENST00000471260 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 KANSL1LA0AUZ9 987 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ZNF233A6NK53 670 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 MOSPD3O75425 235 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ITGB3P05106 788 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 MYL4P12829 197 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ME1P48163 572 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ASIC1P78348 528 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 SNW1Q13573 536 aaKnown RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 HS1BP3Q53T59 392 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 FAM78AQ5JUQ0 283 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 FAM26FQ5R3K3 315 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 FOXD4L5Q5VV16 416 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 RESP18Q5W5W9 173 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 TANGO2Q6ICL3 276 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 POTEHQ6S545 545 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 EPM2AIP1Q7L775 607 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 DCP1BQ8IZD4 617 aaKnown RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 HS6ST3Q8IZP7 471 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 TMEM86AQ8N2M4 240 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 C1orf127Q8N9H9 656 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ATAD1Q8NBU5 361 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 ST13P5Q8NFI4 369 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 PJA1Q8NG27 643 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 OR10T2Q8NGX3 314 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 DEPDC1BQ8WUY9 529 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 FOXD4L4Q8WXT5 416 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 PSMG2Q969U7 264 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 TRIM44Q96DX7 344 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 TMEM209Q96SK2 561 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 PHOX2BQ99453 314 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 LRRC3Q9BY71 257 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 DNAJC25Q9H1X3 360 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 CRISPLD1Q9H336 500 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 PCIF1Q9H4Z3 704 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 TRPV5Q9NQA5 729 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
HMGN1-211ENST00000471260 RCOR1Q9UKL0 485 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 UBE4BO95155 1302 aa14.54□□□□□ -0.08
HMGN1-211ENST00000471260 PSMC3P17980 439 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 FCARP24071 287 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 POLR2BP30876 1174 aaKnown RBP14.53□□□□□ -0.08
HMGN1-211ENST00000471260 MAGEA9P43362 315 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 RBP5P82980 135 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 EHHADHQ08426 723 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 VEPH1Q14D04 833 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 ANGPT1Q15389 498 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 SLC39A12Q504Y0 691 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 WSCD1Q658N2 575 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 DPH6Q7L8W6 267 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 DNAJB7Q7Z6W7 309 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-211ENST00000471260 TMC8Q8IU68 726 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 CSGALNACT2Q8N6G5 542 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 ZSWIM2Q8NEG5 633 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 CXorf38Q8TB03 319 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 IRF7Q92985 503 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 ANKRD36BP1Q96IX9 119 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 ACBD6Q9BR61 282 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 TRMT61BQ9BVS5 477 aaKnown RBP14.53□□□□□ -0.08
HMGN1-211ENST00000471260 PLA2G2FQ9BZM2 168 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 PDE11AQ9HCR9 933 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 FAM86C1Q9NVL1 165 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 CGNQ9P2M7 1197 aaKnown RBP14.53□□□□□ -0.08
HMGN1-211ENST00000471260 ZMYM5Q9UJ78 669 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 AGAP1Q9UPQ3 857 aa14.53□□□□□ -0.08
HMGN1-211ENST00000471260 R3HCC1Q9Y3T6 440 aaKnown RBP14.53□□□□□ -0.08
HMGN1-211ENST00000471260 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 NCAM2O15394 837 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 HUS1O60921 280 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 TMEM191BP0C7N4 346 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 WEE1P30291 646 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 WNT7BP56706 349 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 TSPY1Q01534 308 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 MYO1EQ12965 1108 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 NFE2Q16621 373 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-211ENST00000471260 DUOXA2Q1HG44 320 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 SHKBP1Q8TBC3 707 aa14.52□□□□□ -0.09
HMGN1-211ENST00000471260 ZSCAN18Q8TBC5 510 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms