RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SMOQ99835 787 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SPATA5L1Q9BVQ7 753 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 C1orf43Q9BWL3 253 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TINAGL1Q9GZM7 467 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 BRD9Q9H8M2 597 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SLAMF7Q9NQ25 335 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 MAN1C1Q9NR34 630 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SEMA4GQ9NTN9 838 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 GNL3LQ9NVN8 582 aaKnown RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 MRPS18AQ9NVS2 196 aaKnown RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 RLIMQ9NVW2 624 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ASB6Q9NWX5 421 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SIDT1Q9NXL6 827 aaKnown RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ETAA1Q9NY74 926 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CFAP97Q9P2B7 532 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SLC17A6Q9P2U8 582 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FEZ2Q9UHY8 353 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SETD1BQ9UPS6 1966 aaKnown RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 A0A0B4J269 797 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 LRRC3CA6NJW4 275 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 LINC00473A8K010 186 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ADM5C9JUS6 153 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 POLRMTO00411 1230 aaKnown RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SLC16A6O15403 523 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ORC4O43929 436 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SNUPNO95149 360 aaKnown RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ARIH2O95376 493 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 MATN4O95460 622 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 IL33O95760 270 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CHEK2O96017 543 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 GJB1P08034 283 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 RHOP08100 348 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 FTH1P19P0C7X4 201 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 RARBP10826 455 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CHRM3P20309 590 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 LPOP22079 712 aaPredicted RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SMARCA1P28370 1054 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 PRDX5P30044 214 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CYP2C19P33261 490 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 GRIA3P42263 894 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 PHKA1P46020 1223 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 NDUFV1P49821 464 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 NEK2P51955 445 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 MAP2K6P52564 334 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 KRTAP10-5P60370 271 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 TUBB3Q13509 450 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 HLXQ14774 488 aaPredicted RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 KIF22Q14807 665 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 PTPROQ16827 1216 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 KLHL22Q53GT1 634 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 BRDTQ58F21 947 aaPredicted RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 AKNAD1Q5T1N1 836 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 KAZNQ674X7 775 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SLC30A10Q6XR72 485 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 TSHZ1Q6ZSZ6 1077 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 HEATR3Q7Z4Q2 680 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 FAM90A1Q86YD7 464 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 FAM9AQ8IZU1 332 aaPredicted RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 C3orf20Q8ND61 904 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 PSD4Q8NDX1 1056 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ZCRB1Q8TBF4 217 aaKnown RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ZNF384Q8TF68 577 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SARAFQ96BY9 339 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CHMP4CQ96CF2 233 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 GPATCH3Q96I76 525 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CNPPD1Q9BV87 410 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 GTPBP4Q9BZE4 634 aaKnown RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SMOC2Q9H3U7 446 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 WDCPQ9H6R7 721 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 GPR35Q9HC97 309 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 CPNE5Q9HCH3 593 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 IL17RBQ9NRM6 502 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 HOMER2Q9NSB8 354 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ARPP21Q9UBL0 812 aaPredicted RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ABCF2Q9UG63 623 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 AGAP1Q9UPQ3 857 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 POLHQ9Y253 713 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 FRMD4BQ9Y2L6 1034 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 LUC7L2Q9Y383 392 aaKnown RBP1.89□□□□□ -2.11
UBXN4-207ENST00000471246 SPEF1Q9Y4P9 236 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 PCDHA3Q9Y5H8 950 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 ENTPD2Q9Y5L3 495 aa1.89□□□□□ -2.11
UBXN4-207ENST00000471246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 WDR27A2RRH5 827 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 CCDC151A5D8V7 595 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PRSS29PA6NIE9 313 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 VWC2LB2RUY7 222 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 M0QYG6 137 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 VPS4BO75351 444 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 RBMXL2O75526 392 aaKnown RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 URI1O94763 535 aaPredicted RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 KIF20AO95235 890 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 AHSGP02765 367 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ELFN1P0C7U0 828 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 TYRP14679 529 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PDCP20941 246 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 GPD1P21695 349 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PCSK6P29122 969 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 HNRNPMP52272 730 aaKnown RBP eCLIP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms