RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 USP45Q70EL2 814 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF572Q7Z3I7 529 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-206ENST00000470687 CMTM4Q8IZR5 234 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 DIS3LQ8TF46 1054 aaKnown RBP3.38□□□□□ -1.87
UBXN4-206ENST00000470687 FATE1Q969F0 183 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 TIFAQ96CG3 184 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 IL23AQ9NPF7 189 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 AASDHPPTQ9NRN7 309 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 FBXO34Q9NWN3 711 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 SLC45A2Q9UMX9 530 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 RPTORQ8N122 1335 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 COL22A1Q8NFW1 1626 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 NRXN3Q9Y4C0 1643 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 PIK3C2GO75747 1445 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 BLMP54132 1417 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ANKARQ7Z5J8 1434 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 YTHDC2Q9H6S0 1430 aaKnown RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 BCL9LQ86UU0 1499 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 NRXN1Q9ULB1 1477 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 SETD1AO15047 1707 aaKnown RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ST20-MTHFSA0A0A6YYL1 179 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 HOXA3O43365 443 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 AKR1B10O60218 316 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 S100BP04271 92 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 SLC6A2P23975 617 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 NKX6-1P78426 367 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 FAM189BP81408 668 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 TLE1Q04724 770 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ACAP2Q15057 778 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 CLUL1Q15846 466 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 GAGE13Q4V321 117 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 MUM1L1Q5H9M0 696 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 FKBP15Q5T1M5 1219 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 Q6YL49 198 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 KRT27Q7Z3Y8 459 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ELOA2Q8IYF1 753 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 MB21D1Q8N884 522 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 OR7D4Q8NG98 312 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ATXN2LQ8WWM7 1075 aaKnown RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 GFM2Q969S9 779 aaKnown RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 STK26Q9P289 416 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 DKK2Q9UBU2 259 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-206ENST00000470687 PPLO60437 1756 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ADGRF5Q8IZF2 1346 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 LRP6O75581 1613 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 CLTCL1P53675 1640 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 PARD3Q8TEW0 1356 aa3.37□□□□□ -1.87
UBXN4-206ENST00000470687 ATRNO75882 1429 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 MYOM2P54296 1465 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 DLC1Q96QB1 1528 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 LEFTY2O00292 366 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 FSBPO95073 299 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 ELANEP08246 267 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 TOB1P50616 345 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 SLC5A3P53794 718 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 SESN2P58004 480 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 MEF2AQ02078 507 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 TAP1Q03518 808 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 MAP3K12Q12852 859 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 TIGD2Q4W5G0 525 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 AFMIDQ63HM1 303 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 NAIF1Q69YI7 327 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 FAM90A1Q86YD7 464 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 GLB1L2Q8IW92 636 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 Q8NA96 180 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 NGDNQ8NEJ9 315 aaKnown RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 OR52N2Q8NGI0 321 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF512Q96ME7 567 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 AIFM3Q96NN9 605 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 PRAM1Q96QH2 718 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 UIMC1Q96RL1 719 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 VRK1Q99986 396 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 TCF25Q9BQ70 676 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 NDC1Q9BTX1 674 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 BCO1Q9HAY6 547 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 CYP4F11Q9HBI6 524 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 TCEAL9Q9UHQ7 104 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 PNMA8BQ9ULN7 279 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-206ENST00000470687 AGAP1Q9UPQ3 857 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 ANKRD6Q9Y2G4 727 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 KIF1AQ12756 1690 aa3.36□□□□□ -1.87
UBXN4-206ENST00000470687 PXDNQ92626 1479 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 SLIT2O94813 1529 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 AHRRA9YTQ3 701 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 E9PLN8 166 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 F2RL2O00254 374 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF185O15231 689 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 PRAMEF4O60810 478 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 TUSC2O75896 110 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 JUNP05412 331 aaKnown RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 TYRP1P17643 537 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 WNT3AP56704 352 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 SLFN5Q08AF3 891 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 BOP1Q14137 746 aaKnown RBP3.35□□□□□ -1.87
UBXN4-206ENST00000470687 MLC1Q15049 377 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 PPP2R5AQ15172 486 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 NBPF8Q3BBV2 869 aa3.35□□□□□ -1.87
UBXN4-206ENST00000470687 FAM47AQ5JRC9 791 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms