RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 MTSS1O43312 755 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 RIPK2O43353 540 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 AKAP10O43572 662 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 STX10O60499 249 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ADAM11O75078 769 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SIN3BO75182 1162 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 FBXO24O75426 580 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 MAFO75444 373 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 KRT34O76011 436 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 KLHL2O95198 593 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CRYZL1O95825 349 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ASGR1P07306 291 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 HOXD8P13378 290 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ALOX12P18054 663 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CTNNA2P26232 953 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PPP1R2P41236 205 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CCT5P48643 541 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 RGS7P49802 495 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 NRLP54845 237 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 RACK1P63244 317 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SLFN5Q08AF3 891 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8FQ08AF8 430 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8DPQ0D2H9 430 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 LSAMPQ13449 338 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PICALMQ13492 652 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 P3H1Q32P28 736 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ZCWPW2Q504Y3 356 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ARHGAP29Q52LW3 1261 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SGO2Q562F6 1265 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 FYB2Q5VWT5 728 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PPP1R2P3Q6NXS1 205 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ALKBH5Q6P6C2 394 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SYT9Q86SS6 491 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 COMTD1Q86VU5 262 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 TSPYL5Q86VY4 417 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF677Q86XU0 584 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 TCEAL8Q8IYN2 117 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 TRMT2AQ8IZ69 625 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ST13P4Q8IZP2 240 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 FUKQ8N0W3 1084 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CNTROBQ8N137 903 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 LZTR1Q8N653 840 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 C7orf31Q8N865 590 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DNAAF3Q8N9W5 541 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SPATA5Q8NB90 893 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ATAD1Q8NBU5 361 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 GALNT11Q8NCW6 608 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CNNM3Q8NE01 707 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ATP8B4Q8TF62 1192 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DDI1Q8WTU0 396 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SEPT8Q92599 483 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC127Q96BQ5 260 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF274Q96GC6 653 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 REXO5Q96IC2 774 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 EXOC2Q96KP1 924 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DDX50Q9BQ39 737 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ELAC2Q9BQ52 826 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 NUDT16L1Q9BRJ7 211 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SIKE1Q9BRV8 207 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 TFB2MQ9H5Q4 396 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 IGFLR1Q9H665 355 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 LIN28AQ9H9Z2 209 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 TM9SF3Q9HD45 589 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ARFGAP3Q9NP61 516 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SEMA3GQ9NS98 782 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SAMSN1Q9NSI8 373 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 LMBRD1Q9NUN5 540 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 INTS10Q9NVR2 710 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 NOP53Q9NZM5 478 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 GGT7Q9UJ14 662 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DNM3Q9UQ16 869 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CBY1Q9Y3M2 126 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CACNG2Q9Y698 323 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 COMMD3-BMI1R4GMX3 469 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ADGRL1O94910 1474 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CEP164Q9UPV0 1460 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ACEP12821 1306 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 E2F8A0AVK6 867 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC151A5D8V7 595 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DPPA5A6NC42 116 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 OR6C74A6NCV1 312 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CAPN14A8MX76 684 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 MIF4GDA9UHW6 222 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CENPBD1B2RD01 187 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 J3QW42 95 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 N4BP3O15049 544 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 BUB1BO60566 1050 aaPredicted RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TLR2O60603 784 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 BAG3O95817 575 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 IFNA14P01570 189 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PDHA1P08559 390 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PABPC4LP0CB38 370 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SELLP14151 372 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 POU2F1P14859 743 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PPP2R1AP30153 589 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms