RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 NGRNQ9NPE2 291 aaKnown RBP12.06□□□□□ -0.48
MSH5-214ENST00000468602 HSFX1Q9UBD0 423 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 MTRRQ9UBK8 725 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CAPN11Q9UMQ6 739 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 PRG3Q9Y2Y8 225 aaPredicted RBP12.06□□□□□ -0.48
MSH5-214ENST00000468602 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 PLXNA4Q9HCM2 1894 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 OR6C75A6NL08 312 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 F8W810 466 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 PAEPP09466 180 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 CTNNB1P35222 781 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 SPOPLQ6IQ16 392 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 FAM171BQ6P995 826 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 RTL10Q7L3V2 364 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 ARHGEF19Q8IW93 802 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 TMEM130Q8N3G9 435 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 LNX1Q8TBB1 728 aaPredicted RBP12.05□□□□□ -0.48
MSH5-214ENST00000468602 WHAMMQ8TF30 809 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 PKMYT1Q99640 499 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 RTP3Q9BQQ7 232 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 AIPL1Q9NZN9 384 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 IMPACTQ9P2X3 320 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 DNAJC12Q9UKB3 198 aa12.05□□□□□ -0.48
MSH5-214ENST00000468602 SPTBN5Q9NRC6 3674 aaKnown RBP12.05□□□□□ -0.48
MSH5-214ENST00000468602 NT5C1B-RDH14C9J2C7 533 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 EPHB6O15197 1021 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 IBSPP21815 317 aaPredicted RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 PCSK1P29120 753 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 TKTP29401 623 aaKnown RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 GLUD2P49448 558 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 ZBED6P86452 979 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 RTP2Q5QGT7 225 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 VARS2Q5ST30 1063 aaKnown RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 FAM171A1Q5VUB5 890 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 WSCD1Q658N2 575 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 ADGRF2Q8IZF7 708 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 CEP295NLQ96MC4 621 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 SDCBP2Q9H190 292 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
MSH5-214ENST00000468602 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 TLR9Q9NR96 1032 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 CDH9Q9ULB4 789 aa12.04□□□□□ -0.48
MSH5-214ENST00000468602 F8VZ95 297 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 PES1O00541 588 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 LPXNO60711 386 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 ABLIM3O94929 683 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 ADCY5O95622 1261 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 GYPCP04921 128 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 FECHP22830 423 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 PBX3P40426 434 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 PRKCIP41743 596 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 KLK7P49862 253 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 BPIFB4P59827 614 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 CDK17Q00537 523 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 GPM6BQ13491 265 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 MAPRE1Q15691 268 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 OVOS1Q6IE37 1185 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 ZNF280DQ6N043 979 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 THEM5Q8N1Q8 247 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 HDAC7Q8WUI4 952 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 PDLIM2Q96JY6 352 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 TNIP3Q96KP6 325 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 DNAJC7Q99615 494 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 ARID3AQ99856 593 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 NT5C1AQ9BXI3 368 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 ZCWPW1Q9H0M4 648 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 SMYD3Q9H7B4 428 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms